CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAGCCCCTGCTGGTGCCCCAGCCCCCAAGGCCTCCCCCTGGGCA
GATTCAGAGAAGAGAATGGAATCTTTCAAGCTGTTGGGGCGGTTTTTTTT
TTTGAGACCTTGGAGTCCAGCCCCCTTTTTAGATGGATGGGAAAACTGAG
GCCTGGAGAGGGGAGACAGGAACTGCCCAAGTCACGCAGAGTTCACCGGA
CTGGCCCTCACCCAGGTCTCCTGACTTCCAGTCCATTGCCTCTTCAACAC
CCACCAGACCCCCTCCCATCTGGCTTGCTCACTATGGACCCAGGGATCCC
CTTCTCTGGCACTTTAGTTTCTCCTAGGCACCCCTCCGTGGGGCCTGGGA
GTGTGAAATCTGGAAAGAAAAGGCCAGAGGTGTCTGTGACTTAGGGCATT
GCCCAGGGAAGGAAGCCATTCTCCCTTTGAAAGAGGCAGCAGGAGTTTTT
GCTAACTGGTCTCTTTGCCTCCAATTCCCTGCCTGGTCCAGACTAAACTA
CACTTCACCCTAGCCCAGAAGGCTTGTTGAGCCCCACAAGCATGCTCTGT
CCAAGGCCTCTGTGGCCTCTGCAGGTGTGTGCATTCTCGCCCCTCCAGGG
AGGTTCTTACACCAAAGCCCAAGCCCAAGGGAGATCCTGGATAAATCTGG
GCCCGCTTTGTGTGGAGAAAAAATACGGGGATCAAAAATCCCCCACCCCC
TTTTCCTTCTCCTTAATCCCCAAAAGTGGGG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCCTCTTCTTGGTCTACATGAAACTGT
TTTCACTGTGTCGCAAGAGAGAAGCAGTAATGGAGGAAGAAGGATGCCAA
GGACCATGCTGAGGCATTTCCATAGGTGATCTAATTTATTCCTTGCATCC
ACTCAAAGGGCAAGGATAGAGTTCATTCCTGTTCTACAGATGAGGGCACT
GAAGCTCGTCGTCTTAGTGTTTCCATTGTTGTGAAGAGATAGCATGACCA
AGGCAAGTCTTATAAAGAACAACATTTAATTGGGGCTGGCTTACAGGTTC
AGAGGGTCAGTCCATTAGCATCAAAGCAGGAGCATGGCAGCTTCTAGACA
GGCATGGTGCAGGCAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCAAA
CAGGAGAAGATTGGCTTCCAGGCAGCTAGGAGGAAGATCTCTCAAAGCCC
ACTCCCACAGTGTCACACCTACTCCAACAAGGCCACACCTCCTAATAGAG
TCACTCCCTGAGCCAAGCATATTCAAACCACCACACTTGTGACTCCAAAG
GAGCTAGCCCAGGGTCCCAGAGCTGGTCCTCCATGGAGCAGGGACTGCAA
TGATGCTCTCAGGACTCTGTGAGAAGGCCTTGTTCCTTCTCTACACCAAA
GCATGTGTGAAGAGGCTGATATGCCCGGATTGTTTGTTAAGCCAACCACT
ACAACAGGTAN

Query= MSMg01no437_p14.b1 MSMg01no437_p14.b1 CHROMAT_FILE:
MSMg01no437_p14.b1 PHD_FILE: MSMg01no437_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:33 2005
         (535 letters)



>mm_chrX_96348309_96349243
          Length = 935

 Score =  988 bits (511), Expect = 0.0
 Identities = 530/541 (97%), Gaps = 9/541 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcagcccctgctggtgccccagcccccaaggcctccccctgggcagattcaga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggaattctcagcccctgctggtgccccagcccccaaggcctccccctgggcagattcaga 254

                                                                       
Query: 64  gaagagaatggaatctttcaagctgttggggcgg-------tttttttttttgagacctt 116
           ||||||||||||||||||||||||||||||||||       |||||||||||||||||||
Sbjct: 255 gaagagaatggaatctttcaagctgttggggcggttttttttttttttttttgagacctt 314

                                                                       
Query: 117 ggagtccagccccctttttagatggatgggaaaactgaggcctggagaggggagacagga 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggagtccagccccctttttagatggatgggaaaactgaggcctggagaggggagacagga 374

                                                                       
Query: 177 actgcccaagtcacgc--agagttcaccggactggccctcacccaggtctcctgacttcc 234
           |||||||| |||||||  |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 375 actgcccaggtcacgcagagagctcaccggactggccctcacccaggtctcctgacttcc 434

                                                                       
Query: 235 agtccattgcctcttcaacacccaccagaccccctcccatctggcttgctcactatggac 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agtccattgcctcttcaacacccaccagaccccctcccatctggcttgctcactatggac 494

                                                                       
Query: 295 ccagggatccccttctctggcactttagtttctcctaggcacccctccgtggggcctggg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccagggatccccttctctggcactttagtttctcctaggcacccctccgtggggcctggg 554

                                                                       
Query: 355 agtgtgaaatctggaaagaaaaggccagaggtgtctgtgacttagggcattgcccaggga 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agtgtgaaatctggaaagaaaaggccagaggtgtctgtgacttagggcattgcccaggga 614

                                                                       
Query: 415 aggaagccattctccctttgaaagaggcagcaggagtttttgctaactggtctctttgcc 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aggaagccattctccctttgaaagaggcagcaggagtttttgctaactggtctctttgcc 674

                                                                       
Query: 475 tccaattccctgcctggtccagactaaactacacttcaccctagcccagaaggcttgttg 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tccaattccctgcctggtccagactaaactacacttcaccctagcccagaaggcttgttg 734

            
Query: 535 a 535
           |
Sbjct: 735 a 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)