MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-440F18
Chromosome	X (Build37)
Map Location	35,685,072 - 35,685,468
singlet/doublet	singlet
Overlap gene	Atp1b4
Upstream gene	2610020O08Rik, Akap14, Ndufa1, Rnf113a1, Gm9, Rhox1, Rhox2, Rhox3, Rhox4a, LOC100039913, Rhox4b, LOC100039948, Rhox4c, EG434760, LOC546295, Rhox4d, LOC100040016, Rhox4e, LOC100040043, LOC621852, Rhox4h, LOC546294, EG621903, EG434766, Rhox4g, EG434758, LOC622301, EG622311, Rhox6, Rhox7, Rhox8, LOC436198, Rhox9, LOC100039620, 4930525M21Rik, 4930430D24Rik, Rhox10, Rhox11, Rhox12, 1700123J19Rik, Zbtb33, 6430550H21Rik, EG665331
Downstream gene	Gm40, EG227112, Lamp2, LOC100040971, EG665352, LOC670495, Cul4b, Mcts1, C1galt1c1, EG665369, 6030498E09Rik, LOC547171, LOC670539, LOC100039700
Link	Open Mouse BAC browser

Click to get alignment info.

name	2610020O08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67050 MGI:1914300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434756 MGI:3618288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54405 MGI:1929511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf113a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69942 MGI:1917192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194854 MGI:2684855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:385343 MGI:3580237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75199 MGI:1922449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382209 MGI:2676626
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664609 MGI:3580240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039913 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 8 ESTs, 9 Proteins

name	Rhox4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57737 MGI:1930129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039948 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 8 ESTs, 9 Proteins

name	Rhox4c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434759 MGI:3613386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434760 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434760 MGI:3648779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546295 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	Rhox4d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664610 MGI:3613388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040016 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 8 ESTs, 6 Proteins

name	Rhox4e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194856 MGI:3613390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040043 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040043
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 4 ESTs, 8 Proteins

name	LOC621852 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox4h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:636177 MGI:3613392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546294 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 7 Proteins

name	EG621903 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621903 MGI:3645894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 81 ESTs, 2 Proteins

name	EG434766 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434766 MGI:3648776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 9 ESTs, 8 Proteins

name	Rhox4g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664608 MGI:3613394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434758 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434758 MGI:3704137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 3 ESTs, 8 Proteins

name	LOC622301 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 5 ESTs, 5 Proteins

name	EG622311 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622311 MGI:3646282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Rhox6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19202 MGI:1202888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547168 MGI:3580246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434768 MGI:3579898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC436198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436198
definition	gene_synonym : Rhox7-like note : reproductive homeobox 7 pseudogene pseudo : _no_value

name	Rhox9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104384 MGI:1890128
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039620 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039620
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	4930525M21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436199 MGI:3588262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins

name	4930430D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194735 MGI:3588265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434769 MGI:3580249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194738 MGI:2681831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhox12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382282 MGI:2685994
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700123J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73614 MGI:1920864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein

name	Zbtb33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56805 MGI:1927290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	6430550H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245386 MGI:3045722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665331 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665331 MGI:3643148
definition	note : predicted gene, EG665331 pseudo : _no_value

name	Atp1b4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67821 MGI:1915071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194740 MGI:2684886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	EG227112 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227112 MGI:3644655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 mRNAs, 272 ESTs, 5 Proteins

name	Lamp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16784 MGI:96748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040971 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG665352 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665352 MGI:3644312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC670495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Cul4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72584 MGI:1919834
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mcts1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68995 MGI:1916245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1galt1c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59048 MGI:1913493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665369 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665369 MGI:3647499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 115 ESTs, 5 Proteins

name	6030498E09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77883 MGI:1925133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547171 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC670539 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670539
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039700 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	2610020O08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802718 GeneID:67050 MGI:1914300
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610020O08 gene transcript_id : NM_025937.3

name	Akap14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366588 GeneID:434756 MGI:3618288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 14 transcript_id : NM_001033785.2

name	Ndufa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110556627 GeneID:54405 MGI:1929511
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 transcript_id : NM_019443.2

name	Rnf113a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23943839 GeneID:69942 MGI:1917192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 113A1 transcript_id : NM_153503.1

name	Gm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387066 GeneID:194854 MGI:2684855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 9, (NCBI) transcript_id : NM_001033234.2

name	Rhox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115311557 GeneID:385343 MGI:3580237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 1 transcript_id : NM_001025084.2

name	Rhox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598897 GeneID:75199 MGI:1922449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 2 transcript_id : NM_029203.2

name	Rhox3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73088779 GeneID:382209 MGI:2676626
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 3 transcript_id : NM_194063.2

name	Rhox4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242155 GeneID:664609 MGI:3580240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4A transcript_id : NM_001039688.1

name	LOC100039913 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271497 GeneID:100039913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 1 transcript_id : XM_001474057.1

name	LOC100039913 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271499 GeneID:100039913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 9 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 2 transcript_id : XM_001474076.1

name	Rhox4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242132 GeneID:57737 MGI:1930129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4B transcript_id : NM_021300.2

name	LOC100039948 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271501 GeneID:100039948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 1 transcript_id : XM_001474133.1

name	LOC100039948 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271503 GeneID:100039948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 9 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 2 transcript_id : XM_001474151.1

name	Rhox4c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242149 GeneID:434759 MGI:3613386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4C transcript_id : NM_001039689.1

name	EG434760 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133779005 GeneID:434760 MGI:3648779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG434760 transcript_id : NM_001081669.2

name	Rhox4d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242161 GeneID:664610 MGI:3613388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4D transcript_id : NM_001039695.1

name	LOC100040016 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271506 GeneID:100040016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 1 transcript_id : XM_001474270.1

name	LOC100040016 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271508 GeneID:100040016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 6 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 2 transcript_id : XM_001474291.1

name	Rhox4e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242131 GeneID:194856 MGI:3613390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4E transcript_id : NM_201236.3

name	LOC100040043 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271512 GeneID:100040043
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 3 ESTs, 8 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 2 transcript_id : XM_001474397.1

name	LOC100040043 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271510 GeneID:100040043
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to reproductive homeobox on X chromosome 2, transcript variant 1 transcript_id : XM_001474373.1

name	LOC621852 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:91598659 GeneID:621852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : similar to similar to testis expressed homeobox 2 transcript_id : NM_001040089.1

name	Rhox4h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242159 GeneID:636177 MGI:3613392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4H transcript_id : NM_001039696.1

name	LOC546294 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407302 GeneID:546294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 7 Proteins product : similar to testis expressed homeobox 2, transcript variant 2 transcript_id : XM_976278.1

name	EG621903 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271514 GeneID:621903 MGI:3645894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 81 ESTs, 2 Proteins product : predicted gene, EG621903 transcript_id : XM_885629.3

name	EG434766 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407309 GeneID:434766 MGI:3648776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 9 ESTs, 8 Proteins product : predicted gene, EG434766 transcript_id : XM_486662.3

name	Rhox4g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242157 GeneID:664608 MGI:3613394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 4G transcript_id : NM_001039698.1

name	EG434758 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271517 GeneID:434758 MGI:3704137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins product : predicted gene, EG434758, transcript variant 2 transcript_id : XM_885355.3

name	EG434758 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271515 GeneID:434758 MGI:3704137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein product : predicted gene, EG434758 transcript_id : XM_001474585.1

name	LOC622301 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271518 GeneID:622301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 5 ESTs, 5 Proteins product : similar to reproductive homeobox on X chromosome 2 transcript_id : XM_886726.3

name	EG622311 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271493 GeneID:622311 MGI:3646282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG622311 transcript_id : XM_886739.2

name	Rhox6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679512 GeneID:19202 MGI:1202888
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 6 transcript_id : NM_008955.1

name	Rhox7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71480151 GeneID:547168 MGI:3580246
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 7 transcript_id : NM_001025086.1

name	Rhox8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598892 GeneID:434768 MGI:3579898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 8 transcript_id : NM_001004193.2

name	Rhox9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963858 GeneID:104384 MGI:1890128
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 9 transcript_id : NM_023894.1

name	LOC100039620 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271519 GeneID:100039620
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to reproductive homeobox on X chromosome 11 transcript_id : XM_001473213.1

name	4930525M21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407316 GeneID:436199 MGI:3588262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : RIKEN cDNA 4930525M21 gene transcript_id : XM_975819.1

name	4930430D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803081 GeneID:194735 MGI:3588265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930430D24 gene transcript_id : NM_001034856.2

name	Rhox10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91206460 GeneID:434769 MGI:3580249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 10 transcript_id : NM_001024850.2

name	Rhox11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91206457 GeneID:194738 MGI:2681831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 11 transcript_id : NM_198598.2

name	Rhox12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91206459 GeneID:382282 MGI:2685994
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reproductive homeobox 12 transcript_id : NM_001025083.2

name	1700123J19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271546 GeneID:73614 MGI:1920864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein product : RIKEN cDNA 1700123J19 gene transcript_id : XM_976021.2

name	Zbtb33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118442831 GeneID:56805 MGI:1927290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 33 transcript_id : NM_020256.2

name	Zbtb33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118442829 GeneID:56805 MGI:1927290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 33 transcript_id : NM_001079513.1

name	6430550H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254260 GeneID:245386 MGI:3045722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6430550H21 gene transcript_id : NM_172930.2

name	Atp1b4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130945 GeneID:67821 MGI:1915071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, (Na+)/K+ transporting, beta 4 polypeptide transcript_id : NM_133690.2

name	Gm40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271548 GeneID:194740 MGI:2684886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : gene model 40, (NCBI) transcript_id : XM_111896.2

name	EG227112 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407323 GeneID:227112 MGI:3644655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 mRNAs, 272 ESTs, 5 Proteins product : predicted gene, EG227112 transcript_id : XM_887151.2

name	Lamp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63054836 GeneID:16784 MGI:96748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysosomal-associated membrane protein 2 transcript_id : NM_001017959.1

name	Lamp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63054835 GeneID:16784 MGI:96748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysosomal-associated membrane protein 2 transcript_id : NM_010685.3

name	LOC100040971 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271550 GeneID:100040971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100040971 transcript_id : XM_001475716.1

name	Cul4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345589 GeneID:72584 MGI:1919834
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cullin 4B transcript_id : NM_028288.4

name	Mcts1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802633 GeneID:68995 MGI:1916245
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : malignant T cell amplified sequence 1 transcript_id : NM_026902.2

name	C1galt1c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982687 GeneID:59048 MGI:1913493
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1GALT1-specific chaperone 1 transcript_id : NM_021550.2

name	EG665369 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407325 GeneID:665369 MGI:3647499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 115 ESTs, 5 Proteins product : predicted gene, EG665369 transcript_id : XM_976422.1

name	6030498E09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286798 GeneID:77883 MGI:1925133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030498E09 gene transcript_id : NM_183126.2

name	2610020O08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541903 CCDS:CCDS30069.1 GeneID:67050 MGI:1914300
definition	codon_start : 1 exception : mismatches in translation product : nuclear NF-kappaB activating protein protein_id : NP_080213.2

name	Akap14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702101 CCDS:CCDS30070.1 GeneID:434756 MGI:3618288
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 note : A-kinase anchor protein 28 product : A kinase (PRKA) anchor protein 14 protein_id : NP_001028957.1

name	Ndufa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506911 GeneID:54405 MGI:1929511
definition	EC_number : 1.6.99.3 GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : NADH ubiquinone oxidoreductase subunit MWFE; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 (7.5kD, MWFE); NADH dehydrogenase 1 alpha subcomplex, 1 product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 protein_id : NP_062316.1

name	Rnf113a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943840 CCDS:CCDS30072.1 GeneID:69942 MGI:1917192
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 113A1 protein_id : NP_705723.1

name	Gm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701742 CCDS:CCDS30073.1 GeneID:194854 MGI:2684855
definition	codon_start : 1 product : hypothetical protein LOC194854 protein_id : NP_001028406.1

name	Rhox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115311558 GeneID:385343 MGI:3580237
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : reproductive homeobox on X chromosome 1 product : reproductive homeobox on chromosome X, 1 protein_id : NP_001020255.2

name	Rhox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386376 CCDS:CCDS30075.1 GeneID:75199 MGI:1922449
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : reproductive homeobox on X chromosome, 2 product : reproductive homeobox on X chromosome 2 protein_id : NP_083479.1

name	Rhox3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:73088780 CCDS:CCDS30076.1 GeneID:382209 MGI:2676626
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : testis expressed homeobox 2; reproductive homeobox on X chromosome, 3 product : reproductive homeobox 3 protein_id : NP_918952.2

name	Rhox4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242156 GeneID:664609 MGI:3580240
definition	GO_function : GO:0003677 - DNA binding [Evidence ISS] codon_start : 1 product : reproductive homeobox 4A protein_id : NP_001034777.1

name	LOC100039913 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271498 GeneID:100039913
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001474107.1

name	LOC100039913 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271500 GeneID:100039913
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001474126.1

name	Rhox4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946596 CCDS:CCDS30077.1 GeneID:57737 MGI:1930129
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] codon_start : 1 note : homeobox protein EHOX; reproductive homeobox on X chromosome 4; ES cell derived homeobox; ES cell derived homeobox containing product : reproductive homeobox 4B protein_id : NP_067275.1

name	LOC100039948 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271502 GeneID:100039948
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001474183.1

name	LOC100039948 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271504 GeneID:100039948
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001474201.1

name	Rhox4c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242150 GeneID:434759 MGI:3613386
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : reproductive homeobox 4C protein_id : NP_001034778.1

name	EG434760 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133779006 GeneID:434760 MGI:3648779
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC434760 protein_id : NP_001075138.2

name	Rhox4d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242162 GeneID:664610 MGI:3613388
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : novel protein similar to reproductive homeobox 4 Rhox4 product : reproductive homeobox 4D protein_id : NP_001034784.1

name	LOC100040016 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271507 GeneID:100040016
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001474320.1

name	LOC100040016 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271509 GeneID:100040016
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001474341.1

name	Rhox4e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66955889 CCDS:CCDS30078.1 GeneID:194856 MGI:3613390
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : EHOX-like product : reproductive homeobox 4E protein_id : NP_957688.2

name	LOC100040043 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271511 GeneID:100040043
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001474423.1

name	LOC100040043 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271513 GeneID:100040043
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001474447.1

name	LOC621852 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:91598660 GeneID:621852
definition	codon_start : 1 exception : mismatches in translation product : similar to similar to testis expressed homeobox 2 protein_id : NP_001035178.1

name	Rhox4h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242160 GeneID:636177 MGI:3613392
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : reproductive homeobox 4H protein_id : NP_001034785.1

name	LOC546294 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407303 GeneID:546294
definition	codon_start : 1 product : similar to reproductive homeobox on X chromosome 3 isoform 2 protein_id : XP_981372.1

name	EG621903 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000828 GeneID:621903 MGI:3645894
definition	codon_start : 1 product : similar to PGC7 protein_id : XP_890722.1

name	EG434766 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407310 GeneID:434766 MGI:3648776
definition	codon_start : 1 product : hypothetical protein protein_id : XP_486662.2

name	Rhox4g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242158 GeneID:664608 MGI:3613394
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : reproductive homeobox 4G protein_id : NP_001034787.1

name	EG434758 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271516 GeneID:434758 MGI:3704137
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474635.1

name	EG434758 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407312 GeneID:434758 MGI:3704137
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_890448.2

name	LOC622301 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407314 GeneID:622301
definition	codon_start : 1 product : hypothetical protein protein_id : XP_891819.2

name	EG622311 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271494 GeneID:622311 MGI:3646282
definition	codon_start : 1 product : similar to reproductive homeobox on X chromosome 7 protein_id : XP_891832.2

name	Rhox6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679513 CCDS:CCDS30080.1 GeneID:19202 MGI:1202888
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : placenta specific homeobox 1 product : reproductive homeobox on X chromosome, 6 protein_id : NP_032981.1

name	Rhox7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71480152 CCDS:CCDS30081.1 GeneID:547168 MGI:3580246
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation note : reproductive homeobox on X chromosome 7 product : reproductive homeobox on chromosome X, 7 protein_id : NP_001020257.1

name	Rhox8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921377 CCDS:CCDS30082.1 GeneID:434768 MGI:3579898
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : homeoprotein TOX product : reproductive homeobox on X chromosome, 8 protein_id : NP_001004193.1

name	Rhox9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963859 CCDS:CCDS30083.1 GeneID:104384 MGI:1890128
definition	GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] codon_start : 1 note : placenta specific homeobox 2 product : reproductive homeobox on X chromosome, 9 protein_id : NP_076383.1

name	LOC100039620 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271520 GeneID:100039620
definition	codon_start : 1 product : similar to reproductive homeobox on X chromosome 11 protein_id : XP_001473263.1

name	4930525M21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407317 GeneID:436199 MGI:3588262
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980913.1

name	4930430D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702197 GeneID:194735 MGI:3588265
definition	codon_start : 1 note : novel protein similar to B-cell translocation gene 1, anti-proliferative Btg1 product : hypothetical protein LOC194735 protein_id : NP_001030028.1

name	Rhox10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71480140 GeneID:434769 MGI:3580249
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : reproductive homeobox on X chromosome 10 product : reproductive homeobox on chromosome X, 10 protein_id : NP_001020021.1

name	Rhox11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348444 CCDS:CCDS30086.1 GeneID:194738 MGI:2681831
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : reproductive homeobox on X chromosome, 11 protein_id : NP_941000.1

name	Rhox12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71480146 CCDS:CCDS30087.1 GeneID:382282 MGI:2685994
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : reproductive homeobox on X chromosome, 12 protein_id : NP_001020254.1

name	1700123J19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271547 GeneID:73614 MGI:1920864
definition	codon_start : 1 product : hypothetical protein LOC73614 protein_id : XP_981115.2

name	Zbtb33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118442830 GeneID:56805 MGI:1927290
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] [Evidence ISS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : zinc finger transcription factor Kaiso product : kaiso protein protein_id : NP_001072981.1

name	Zbtb33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118442832 CCDS:CCDS30088.1 GeneID:56805 MGI:1927290
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] [Evidence ISS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : zinc finger transcription factor Kaiso product : kaiso protein protein_id : NP_064652.2

name	6430550H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254261 CCDS:CCDS30089.1 GeneID:245386 MGI:3045722
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC245386 protein_id : NP_766518.2

name	Atp1b4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526860 CCDS:CCDS30090.1 GeneID:67821 MGI:1915071
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0005391 - sodium:potassium-exchanging ATPase activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATPase, Na+/K+ transporting, beta 4 polypeptide product : ATPase, (Na+)/K+ transporting, beta 4 polypeptide protein_id : NP_598451.1

name	Gm40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271549 GeneID:194740 MGI:2684886
definition	codon_start : 1 product : similar to CDNA sequence BC049702 protein_id : XP_111896.2

name	EG227112 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000880 GeneID:227112 MGI:3644655
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892244.1

name	Lamp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63054837 CCDS:CCDS30092.1 GeneID:16784 MGI:96748
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005770 - late endosome [Evidence ISS] [Evidence IDA]; GO:0005765 - lysosomal membrane [Evidence ISS]; GO:0005764 - lysosome [Evidence ISS] [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0031088 - platelet dense granule membrane [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; lysosome-associated membrane protein-2; Lamp II; lysosomal membrane glycoprotein 2 product : lysosomal membrane glycoprotein 2 isoform 1 protein_id : NP_001017959.1

name	Lamp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543108 CCDS:CCDS30093.1 GeneID:16784 MGI:96748
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005770 - late endosome [Evidence ISS] [Evidence IDA]; GO:0005765 - lysosomal membrane [Evidence ISS]; GO:0005764 - lysosome [Evidence ISS] [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0031088 - platelet dense granule membrane [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; lysosome-associated membrane protein-2; Lamp II; lysosomal membrane glycoprotein 2 product : lysosomal membrane glycoprotein 2 isoform 2 protein_id : NP_034815.2

name	LOC100040971 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271551 GeneID:100040971
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475766.1

name	Cul4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29501811 GeneID:72584 MGI:1919834
definition	codon_start : 1 exception : mismatches in translation product : cullin 4B protein_id : NP_082564.2

name	Mcts1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312175 CCDS:CCDS30094.1 GeneID:68995 MGI:1916245
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : malignant T cell amplified sequence 1 protein_id : NP_081178.1

name	C1galt1c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946990 CCDS:CCDS30095.1 GeneID:59048 MGI:1913493
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : C1GALT1-specific chaperone 1 protein_id : NP_067525.1

name	EG665369 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407326 GeneID:665369 MGI:3647499
definition	codon_start : 1 product : similar to adaptor-related protein complex 3, sigma 1 subunit protein_id : XP_981516.1

name	6030498E09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286799 GeneID:77883 MGI:1925133
definition	codon_start : 1 product : hypothetical protein LOC77883 protein_id : NP_898949.2

name	EG665352 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665352
definition	number : 1 pseudo : _no_value

name	LOC670495 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670495
definition	number : 1 pseudo : _no_value

name	LOC670495 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670495
definition	number : 2 pseudo : _no_value

name	LOC547171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547171
definition	number : 1 pseudo : _no_value

name	LOC670539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670539
definition	number : 3 pseudo : _no_value

name	LOC670539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670539
definition	number : 2 pseudo : _no_value

name	LOC670539 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670539
definition	number : 1 pseudo : _no_value

name	LOC100039700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039700
definition	number : 2 pseudo : _no_value

name	LOC100039700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039700
definition	number : 1 pseudo : _no_value

name	LOC546295 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271505 GeneID:546295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : similar to reproductive homeobox on X chromosome 3 pseudo : _no_value transcript_id : XR_031662.1

clone name	MSMg01-402L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-411K05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-057A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-431K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522A16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-098D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078N10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506B01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-470E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-440F18.T7 (MSMg01no440_f18.b1)	MSMg01-440F18.TJ (MSMg01no440_f18.g1)
ACC	AG530495	AG530496
length	776	745
length of high quality (start - end)	398 (80 - 477)	398 (88 - 485)
definition	CHROMAT_FILE: MSMg01no440_f18.b1 PHD_FILE: MSMg01no440_f18.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:06:47 2005	CHROMAT_FILE: MSMg01no440_f18.g1 PHD_FILE: MSMg01no440_f18.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:06:47 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTCCTTCTCTNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXCGCGGAATTCAGAGAGTTCCAAGAGGAACCAAATGATGGGAA TGATTAAACAGGGCTACCCTTATCACATCACACCAGGTAATAGAGTGCTC ATGAACTATGGCTGTTATAAACAGGAGAGGTTTGGGGTCTCAAATGGACA AAGAATGCATCTGTATTAGCCAATTACTCCTTAGGGCCATAGGATCACTT CTGTCAGTATACTATATCCAATATAGTATAATTCTTTTTGGTATAAATTG AGCATCCTATAGTTCATTCTGATTATTAACCTATCCTACTTGATTGCTAC TCTGATTATTAACCTATCCTACTTGATTGCTACAAATGGGTGTGGATTTC ACCAGTATTGGTTATTTAAAAAAAAAGTATAGAGGCTGTTAATGTTTCTA CTTTTTTAAACAACCATTCTCAGTAAGTATATAATAACTTGGAAAATGAA CAGCTTACATTAGGGAAATGCAAATAGAAGCTGGCCCCAATTATATGTTA GATTAATAGCTAAGGGATGTGCCTCATTGGGATAACACTTGGTGCCTACT TTTAAACTTCTCTGGCCCTTTTTTATTTTATTCCAAAATTCCCAAACGCA AGTGAATTTTTTCTTTTTATGAAGGCCCGGTGTGTCATCCTGTCCCATCC ATTTTGTATCTCCTCTTTCCCCCCTGCTGTCTTCTTTTTGCAGCACCCCC CTACATTCTAGTAAATAATAGTCTTN	TTTTTTTTTTCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCT GAACCCCATTTTTTAATGGGGTTATTTGATTTTCTTGAGTCTACCTTCTT GAGTTCTTTATATATATTGGATATTAGTCCCCTATCTGATTTAGAATTGG TAAATATCCTTTCCCTATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTG TCTTTTGCCTTACAGAAGCTTTGTAATTTTATGAAGTCCCATTTGTTGAA TCTTGATCTTACAGCACAGGCCATTGCTGTTCTGTTTAGGAATTTTTCCC CTATGCCCATATCTTTGAGGCTTTTCCCCATTTTCTCCTCTATAAGTTTA AGTTTTATTTCAATACAAGAAGAGCTTCTAATTCAAAACTATGATTGTTT TTATTTTTTAAAAAGATTTATTTATTTTATTTATATGAGTCACTTGTATC TGTCTGCAGACACACCCCATATCATGGCTTTCATTCCCCTTTACTTAGGG TTGTATCCTCTCATGTTTTTGGCTGTGTATTTGATCCCTTATCCTTTATT TATACTTTCTCTACTCTTTTTCTTTTTAATGTTCTCTTCTAGTCTCCCCT AATAGGCTTCTTTTTCACTGGAAATTTTTCTTTTTTTCCTTTTATTCCGT CTCATTTTTCTAGTTCCTTATTCTTTCTTATTGTTTTCTTCATTT
quality values	Open. Hide. 10 10 10 10 11 8 8 6 6 3 0 3 7 7 13 10 10 10 12 9 9 10 10 15 9 8 8 8 22 22 37 37 37 40 37 23 25 23 19 9 19 19 23 14 19 11 15 11 9 9 9 10 10 9 9 10 19 19 28 39 37 37 19 15 15 19 23 22 30 18 21 12 9 11 11 12 15 10 10 11 22 23 39 33 33 33 33 33 36 50 53 53 53 53 53 53 53 42 42 40 40 40 42 50 50 53 53 53 48 50 40 47 54 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 68 68 57 57 57 48 48 57 57 57 68 68 68 68 68 68 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 51 51 50 68 68 68 68 59 59 59 59 59 59 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 44 44 32 32 31 31 27 32 36 36 47 48 57 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 54 54 54 54 54 57 59 57 57 57 57 57 57 59 59 59 59 59 48 48 48 48 48 50 44 44 40 40 39 32 32 28 34 36 39 39 37 35 36 37 41 59 59 59 47 47 59 59 59 59 59 30 26 15 12 12 21 11 11 11 18 18 28 28 30 30 25 19 18 21 21 18 26 33 33 36 39 47 47 47 37 19 12 11 13 9 9 12 18 19 22 22 28 30 39 39 34 30 19 15 21 14 18 19 16 18 12 12 10 9 9 15 24 30 25 18 15 12 9 9 10 9 9 9 10 11 11 12 18 20 19 15 17 16 12 22 17 19 11 10 10 11 11 16 13 15 11 11 11 14 14 32 22 14 14 13 13 8 10 13 12 12 9 9 9 6 6 6 10 10 12 11 15 10 10 10 10 10 10 15 14 10 8 8 8 13 14 11 11 11 10 8 8 8 10 8 8 8 8 8 10 8 7 9 10 9 10 8 8 8 7 10 6 6 8 8 10 10 8 8 8 8 8 8 10 12 16 12 10 10 8 8 8 8 8 10 8 8 8 8 8 8 13 13 21 22 16 9 9 9 10 9 10 10 12 19 10 11 10 9 9 9 10 13 15 14 18 17 15 15 12 13 8 8 8 8 8 8 6 6 8 8 10 9 9 12 11 10 10 13 18 16 14 11 8 8 6 6 8 8 9 9 9 9 9 8 8 6 6 8 8 6 8 8 10 8 9 8 8 8 8 10 8 10 10 13 11 11 12 14 22 11 8 8 8 8 10 10 14 12 10 12 8 8 10 13 13 8 11 11 8 8 8 8 8 8 10 10 10 8 8 8 10 8 8 6 8 6 6 8 8 10 10 16 11 11 8 8 12 13 13 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 3 0	Open. Hide. 9 9 9 8 8 10 8 8 8 6 6 6 7 7 10 8 9 9 9 8 7 9 9 9 15 14 26 23 30 30 39 37 33 33 32 31 27 29 39 31 22 15 10 6 6 6 6 6 8 19 11 17 17 31 30 48 48 48 53 39 36 34 34 34 47 47 59 57 44 43 23 22 10 10 10 10 23 23 39 39 43 37 37 37 37 36 36 59 59 59 59 50 50 50 50 50 42 47 44 44 39 39 39 39 41 41 37 37 37 37 59 50 59 47 36 36 42 42 42 57 59 53 53 53 53 53 53 53 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 57 57 59 57 57 57 57 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 57 68 57 59 57 59 59 68 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 52 52 52 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 68 62 62 62 57 59 59 59 68 68 68 38 38 15 18 13 23 23 28 28 35 35 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 59 59 68 59 59 54 54 59 59 57 57 57 57 57 57 57 57 59 68 59 59 57 57 57 57 57 57 52 52 52 52 52 52 44 44 47 47 44 46 46 44 50 50 34 32 20 20 20 30 32 24 32 37 32 32 33 43 43 42 42 28 26 17 17 17 19 18 19 19 24 30 44 44 44 31 38 19 19 10 8 8 19 19 41 36 36 41 41 41 54 47 37 37 28 28 22 16 26 13 13 14 23 24 28 33 35 39 39 43 43 39 39 30 30 30 33 32 24 20 20 14 15 10 10 10 10 12 15 20 15 13 10 9 10 10 10 13 14 14 15 10 11 11 12 11 10 10 9 10 10 10 10 10 9 8 8 8 6 6 6 8 8 9 8 8 8 8 10 10 10 11 8 10 10 8 8 8 8 8 8 8 10 8 8 9 12 17 15 11 10 10 10 10 14 10 8 8 8 8 10 15 15 15 14 10 10 10 10 13 11 8 8 8 6 7 12 9 9 10 8 8 8 10 11 11 8 8 6 6 7 12 11 16 10 11 9 9 10 11 13 15 12 12 10 8 8 8 8 6 6 8 8 19 16 13 10 9 9 10 10 13 10 10 8 8 8 8 12 11 11 11 11 11 11 15 11 11 11 13 11 11 12 10 8 8 8 6 6 6 8 9 8 10 8 8 8 10 14 12 8 8 8 8 6 6 8 8 8 10 10 19 10 10 8 8 8 10 9 10 12 12 12 9 9 9 10 13 8 8 8 10 10 6 6 8 8 10 8 10 10 13 14 16 12 8 8 8 8 8 9 9 11 12 10 9 7 8 8 8 10 8 8 8 8 8 12 11 11 11 15 18 11 11 9 12 11 11 11 12 12

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no440_f18.b1 MSMg01no440_f18.b1 CHROMAT_FILE:
MSMg01no440_f18.b1 PHD_FILE: MSMg01no440_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:47 2005
         (398 letters)



>mm_chrX_35684872_35685668
          Length = 797

 Score =  723 bits (374), Expect = 0.0
 Identities = 392/398 (98%), Gaps = 1/398 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaggaaccaaatgatgggaatgattaaacagggctacccttatcacatcacaccaggta 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 agaggaaccaaataatgggaatgattaaacagggctacccttatcacatcacaccaggta 538

                                                                       
Query: 61  atagagtgctcatgaactatggctgttataaacaggagaggtttggggtctcaaatggac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atagagtgctcatgaactatggctgttataaacaggagaggtttggggtctcaaatggac 478

                                                                       
Query: 121 aaagaatgcatctgtattagccaattactccttagggccataggatcacttctgtcagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaagaatgcatctgtattagccaattactccttagggccataggatcacttctgtcagta 418

                                                                       
Query: 181 tactatatccaatatagtataattctttttggtataaattgagcatcctatagttcattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tactatatccaatatagtataattctttttggtataaattgagcatcctatagttcattc 358

                                                                       
Query: 241 tgattattaacctatcctacttgattgctactctgattattaacctatcctacttgattg 300
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 357 tgattattaacctatcctacttgattgctactctgattattaatctatcctacttgattg 298

                                                                       
Query: 301 ctacaaatgggtgtggatttcaccagtattggttatttaaaaaaaaagtatagaggctgt 360
           |||||||||||||||||||| |||||||||| |||||| ||||||| |||||||||||||
Sbjct: 297 ctacaaatgggtgtggatttgaccagtattgattattttaaaaaaa-gtatagaggctgt 239

                                                 
Query: 361 taatgtttctacttttttaaacaaccattctcagtaag 398
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 taatgtttctacttttttaaacaaccattctcagtaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 797
Length adjustment: 9
Effective length of query: 389
Effective length of database: 788
Effective search space:   306532
Effective search space used:   306532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information