Query= MSMg01no442_i20.b1 MSMg01no442_i20.b1 CHROMAT_FILE:
MSMg01no442_i20.b1 PHD_FILE: MSMg01no442_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:46 2005
(334 letters)
>mm_chrX_139927935_139928668
Length = 734
Score = 551 bits (285), Expect = e-161
Identities = 312/331 (94%), Gaps = 16/331 (4%)
Strand = Plus / Minus
Query: 4 ggaattctctcatatttctctggaggattgtgctcttgacctcatcatcccccatcctaa 63
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggaattctctcagagttctctggaggattgtgctcttgacctcatcatcccccatcctaa 394
Query: 64 gcaataattctttgtttaagagcctttgccacagtacctcagagataccaaacattgcta 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 393 gcaataattctttgtttaagagcttttgccacagtacctcagagataccaaacattgcta 334
Query: 124 cctacactaccaaagaagctttccagacccacaggcacgtggtctctcactaggagttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cctacactaccaaagaagctttccagacccacaggcacgtggtctctcactaggagttta 274
Query: 184 tgtttatacctctgccttggaaggtttggtacaaagcccttcatgtttgcattcacccac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgtttatacctctgccttggaaggtttggtacaaagcccttcatgtttgcattcacccac 214
Query: 244 caccatctacaaaagaatcataatgctatacctctaaagtacatttgctgagttttttta 303
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 213 caccatcta----------------ctatacctctaaagtacatttgctgagttttttta 170
Query: 304 ttgacctatttgcagtaacatgtacaatgca 334
|||||||||||||||||||||||||||||||
Sbjct: 169 ttgacctatttgcagtaacatgtacaatgca 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_i20.g1 MSMg01no442_i20.g1 CHROMAT_FILE:
MSMg01no442_i20.g1 PHD_FILE: MSMg01no442_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:46 2005
(346 letters)
>mm_chrX_139759532_139760277
Length = 746
Score = 621 bits (321), Expect = 0.0
Identities = 336/343 (97%), Gaps = 4/343 (1%)
Strand = Plus / Plus
Query: 1 tcttccccaggctctttgcatagatggctacttttcatctttcatgtttgagtttcaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttccccaggctctttgcatagatggctacttttcatctttcatgtttgagtttcaaga 260
Query: 61 ttctctatccagtgccttactcacaactaaggcataaacctctgaattttaaaatatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctctatccagtgccttactcacaactaaggcataaacctctgaattttaaaatatatt 320
Query: 121 ctttcatttattaccttaataatatttatactgtgtatattttcttgcttatttatttat 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttatttattaccttaataatatttatactgtgtatattttcttgcttatttatttat 380
Query: 181 ttatttttaccttctctgatgaaatgtgagctctgaaagggaaaagaatgtatctttgct 240
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tt----ttaccttctctgatgaaatgtgagctctgaaagggaaaagaatgtatctttgct 436
Query: 241 atggctgcttatgttgtgtcctgacccagggtgacaaaacagaaggtatagaaactttct 300
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atggctgcataggttgtgtcctgacccagggtgacaaaacagaaggtatagaaactttct 496
Query: 301 ggaaaatgacaatagagtgtcctaagtatggggttcctttttg 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggaaaatgacaatagagtgtcctaagtatggggttcctttttg 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
