Query= MSMg01no442_o01.b1 MSMg01no442_o01.b1 CHROMAT_FILE:
MSMg01no442_o01.b1 PHD_FILE: MSMg01no442_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:16 2005
(261 letters)
>mm_chrX_103122869_103123529
Length = 661
Score = 466 bits (241), Expect = e-136
Identities = 253/257 (98%)
Strand = Plus / Minus
Query: 5 gaattcggtgatttctcttctcgaatgagatacaagcttggtgaatagtggcaaaacgaa 64
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 461 gaattcggtgatttttcttctcgaatgagatgcaagcttggtgaatagtggcaaaacgaa 402
Query: 65 attataggtagcgtggatcataattgcatctgtaattggcaaaatgtgccgttgggtgac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 attataggtagcgtggatcataattgcatctgtaattggcaaaatgtgccgttgggtgac 342
Query: 125 taggacatcatggctttgagcactttacattgtataatttgagaacgagcctatccgatt 184
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 341 taggacatcatggctttgagcactttagattgtagaatttgagaacgagcctatccgatt 282
Query: 185 attttctaccttagcaaacagtgcatcgatgctctctttacttagggaaaatatacttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 attttctaccttagcaaacagtgcatcgatgctctctttacttagggaaaatatacttca 222
Query: 245 gttctgtttgtttgttt 261
|||||||||||||||||
Sbjct: 221 gttctgtttgtttgttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_o01.g1 MSMg01no442_o01.g1 CHROMAT_FILE:
MSMg01no442_o01.g1 PHD_FILE: MSMg01no442_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:16 2005
(428 letters)
>mm_chrX_102946412_102947238
Length = 827
Score = 739 bits (382), Expect = 0.0
Identities = 414/428 (96%), Gaps = 10/428 (2%)
Strand = Plus / Plus
Query: 1 attgcaatccttctgtttcggcctccaagaactgggattacacaccaggctctggagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 attgcaatccttctgtttcggcctccaagaactgggattacacaccaggctctggagatt 269
Query: 61 tcatttttggttgcttcagctaaaaaaaaataaaaaataaaaataaaacaaataaagaaa 120
||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||
Sbjct: 270 tcatttttggttgcttcagctaaaaaaaa-taaaaa-taaaaa-aaaa------aagaaa 320
Query: 121 aagtttgaaatagactgatctagctcaactgtctgttttcacaggtagaagagcgggggg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 aagtttgaaatagactgatctagctcaactgtctgttttcacaggtagaagagcagggg- 379
Query: 181 cccacaggtaataaataattcaaaccaaaaccacagacagtgcttttgcagcaatagcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccacaggtaataaataattcaaaccaaaaccacagacagtgcttttgcagcaatagcta 439
Query: 241 ggacaataagccacctctatcagaacagcaatttcttctcagctagttagttgtcctgta 300
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 ggacagtaagccacctctatcagaacagcgatttcttctcagctagttagttgtcctgta 499
Query: 301 tgtcattgtaaagccatggctcagaagctctgaggacaggggagacaccaaggttccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtcattgtaaagccatggctcagaagctctgaggacaggggagacaccaaggttccttt 559
Query: 361 ctatagcatcaagtgctgtgagtaacaatgttagttctcaggtgcaacctgtaaattaaa 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 ctatagcatcaagtgctgtgagtaacaatgttagttctcagatgcaacctgtaaattaaa 619
Query: 421 tgatgagc 428
||||||||
Sbjct: 620 tgatgagc 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
