Query= MSMg01no443_n22.b1 MSMg01no443_n22.b1 CHROMAT_FILE:
MSMg01no443_n22.b1 PHD_FILE: MSMg01no443_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:36 2005
(410 letters)
>mm_chrX_77967513_77968323
Length = 811
Score = 760 bits (393), Expect = 0.0
Identities = 402/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 7 gaattcttttatattaactcagtatgcttttagttcagactgatcttcttatatatatta 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaattcttttatatgaactcagtatgcttttagttcagactgatcttcttatatatatta 644
Query: 67 agatatataatatatcttcttatatatattaacatatacatgttaattgggatgctgttt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agatatataatatatcttcttatatatattaacatatacatgttaattgggatgctgttt 584
Query: 127 gatagcagtaacttgttcagagatttgtttcaaaagacagacacaggatcagcataattc 186
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gatagcagtgacttgttcagagatttgtttcaaaagacagacacaggatcagcataattc 524
Query: 187 atactagtaaatccttgaagaaattctaagatactagcataattccaatgaaggaattct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atactagtaaatccttgaagaaattctaagatactagcataattccaatgaaggaattct 464
Query: 247 gaattcttcagaatatgtgacttttctgggcccaaggcagattggtaatgggaaataaat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gaattcttcagaatatgtgacttttctgggcccaaggcagattggtaatgggaaataaat 404
Query: 307 ggagtctccatatgtctactacatccatatctaatctatatctgtatacctttcctcctg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggagtctccatatgtctactacatccatatctaatctatatctgtatacctttcctcctg 344
Query: 367 tgaataagtaagtactgttttcttactgattt-cttttaaatttt 410
|||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 343 tgaataagtaagtactgttttcttactgattttcttttaaatttt 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 811
Length adjustment: 9
Effective length of query: 401
Effective length of database: 802
Effective search space: 321602
Effective search space used: 321602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_n22.g1 MSMg01no443_n22.g1 CHROMAT_FILE:
MSMg01no443_n22.g1 PHD_FILE: MSMg01no443_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:36 2005
(390 letters)
>mm_chrX_77724323_77725112
Length = 790
Score = 721 bits (373), Expect = 0.0
Identities = 385/389 (98%)
Strand = Plus / Plus
Query: 1 tgattcacttagctaaatcactattggtccaactcagacccaatatttggatacatattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgattcacttagctaaatcactattggtccaactcagacccaatatttggatacatattc 260
Query: 61 agaaaagcatatttgtattaacaggaacatgttaatcttgaaaaaggagtgataaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaagcatatttgtattaacaggaacatgttaatcttgaaaaaggagtgataaaaatc 320
Query: 121 aaacttcaacctatgatgttaaagttagtttttacacattgaaatcctctccacttgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacttcaacctatgatgttaaagttagtttttacacattgaaatcctctccacttgggc 380
Query: 181 aacaagtgtggtgatcttgagcaaactattggaccactactagtttttactttctaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaagtgtggtgatcttgagcaaactattggaccactactagtttttactttctaatga 440
Query: 241 ttagtatagaaataataagagcaactaacttagggaatgtctatatgaattaaatggaat 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tcagtatagaaataataagagcaactaacttagggaatgtctatatgaattaaatgaaat 500
Query: 301 aataaattctttaaaaacaggagagaatgatcaccatagagtaacaacagtaactggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 501 aataaattctttaaaaacaggagagaatgatcaccatagagtaacaacagtaattggttg 560
Query: 361 aattctaatgaatatttttgttactatta 389
|||||||||||||||||||||||||||||
Sbjct: 561 aattctaatgaatatttttgttactatta 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
