Query= MSMg01no445_k22.b1 MSMg01no445_k22.b1 CHROMAT_FILE:
MSMg01no445_k22.b1 PHD_FILE: MSMg01no445_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:58 2005
(502 letters)
>mm_chrX_63190018_63190919
Length = 902
Score = 909 bits (470), Expect = 0.0
Identities = 494/502 (98%)
Strand = Plus / Minus
Query: 1 ccccatccacatcaccagtgactccctgacaaactgcagtcagatatgcatagtagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ccccatccacatcaccagtgactccctgacaaactgcagtcagatatgcatagtagcact 643
Query: 61 gggaccacctggactcattcttcagtctcttgaaggaaagaaatgcacccttgaagttga 120
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 642 gggaccacctggactcattcttcagtctctcgaaggaaacaaatgcacccttgaagttga 583
Query: 121 gttcagtcatgctgtgccagctgatttcatacacacagacatgttgcatctccatctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 582 gttcagtcatgctgtgccagctgatttcatacacacagacatgttgcatctccctctggt 523
Query: 181 ctacagccagctccagagcagaatggacatcaaggcactgttgatttgacactccaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ctacagccagctccagagcagaatggacatcaaggcactgttgatttgacactccaactg 463
Query: 241 ctggatctttttcttgaaaaacatgaagagggaagagtttgggtaagcagactcctttct 300
||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 462 ctggatcaatcccttgaaaaacatgaagagggaagagtttgggtaagcagacacctttct 403
Query: 301 gagaagaattgctttagcttcatccagtccccctttgttatcactgctgtccaaggcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gagaagaattgctttagcttcatccagtccccctttgttatcactgctgtccaaggcaaa 343
Query: 361 gaatgggcagaccacagtaaggtaccgcagggctaatgtagcaaaaggggccttcatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaatgggcagaccacagtaaggtaccgcagggctaatgtagcaaaaggggccttcatgtc 283
Query: 421 ctcacgtttgcttgcatacttcattgaagaaaggccctgttggcagtctccaggaaactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctcacgtttgcttgcatacttcattgaagaaaggccctgttggcagtctccaggaaactc 223
Query: 481 caacaggttaatgattttgaga 502
||||||||||||||||||||||
Sbjct: 222 caacaggttaatgattttgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_k22.g1 MSMg01no445_k22.g1 CHROMAT_FILE:
MSMg01no445_k22.g1 PHD_FILE: MSMg01no445_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:58 2005
(422 letters)
>mm_chrX_63018276_63019101
Length = 826
Score = 797 bits (412), Expect = 0.0
Identities = 421/426 (98%), Gaps = 4/426 (0%)
Strand = Plus / Plus
Query: 1 cctaaagctgcactaaccacatatgactatttaaatttgaattcattttataataaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctaaagctgcactaaccacatatgactatttaaatttgaattcattttataataaatac 260
Query: 61 agcttggtctcatttccagaactcagtggtcacatgtgaataatgactgtgctgtatagc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 agcttggtctcatttccagaactcagtggtcacacgtgaataatgactgtgctgtatagc 320
Query: 121 aaaacaaatgtgaactgtttctctttctatcattcacag----cactgtaccaaagcatt 176
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 aaaacaaatgtgaactgtttctctttctatcattcacagacagcactgtaccaaagcatt 380
Query: 177 acacactgtggttcaaatgcagtttccctgagtgttattaagggaaactcaacatcctaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacactgtggttcaaatgcagtttccctgagtgttattaagggaaactcaacatcctaa 440
Query: 237 agtataggctcttgcattacagaaatgtgaatatattcttggggtaggctttgctacatc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtataggctcttgcattacagaaatgtgaatatattcttggggtaggctttgctacatc 500
Query: 297 cttaatcatctgatgtttgtgcagctctctataattttgataagttcttgctgttattta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttaatcatctgatgtttgtgcagctctctataattttgataagttcttgctgttattta 560
Query: 357 aagagcaagtagcacagggttttgttgacataagacttggagaaagtaagggactcgggg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagagcaagtagcacagggttttgttgacataagacttggagaaagtaagggactcgggg 620
Query: 417 aaaata 422
||||||
Sbjct: 621 aaaata 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 826
Length adjustment: 9
Effective length of query: 413
Effective length of database: 817
Effective search space: 337421
Effective search space used: 337421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
