XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATTATT
ATCTCTGGTGATCACCAACAATTGATTGTTAGGTCCATTCTTGCTTATTC
CTCAGAATATTCCAAATTGCCTTGTTTGGGAGGTGTCAGGCAGCCTGCCT
ACAGAAGCAGTCGTTTGCTCATTTCCTATGCTGATCTGAGTTTGGGTACT
CTGTTGTAATTCCTAGGCCTCTATTGCACCTTCTCCTTCCACCAAAGAAT
GGTCAATCTGAACTGTGATTTGCCCCTTATAGTCACTGTAGTCTACTTAT
CATTTGCCTTTCTGACTAGCTTTAATGTTTCTTTTTTCCCTAAGGCATCT
CTAATTTTAATGTCAACAAAAAGACCAGGGGGAGTTGAGGACAGTTGTTT
CCTTTTAAACCTTCAACTTTTTCCCTCAGCTCTCTCAAGCGCAAAGGTGG
CTTATTTTTAACAATCATGAGTAGATAAACACTACTATCATTTTTCATTT
GTTTATAAAGATAGGTCATACTTGTTGAGGTACCATCTACCTGGTCTGGA
GACTATATGGGTCTTCTGCAGCATGCCTTTTGACTACTTCTGTCCCTTAA
GAACATCACTCAGTAGGTGACCTAGTTAAAAACTATGAAACACAGGATAT
TCAGTTGTGCTCTATGTGAACAGTAAATAACGTCAGATAGAAACTATAAC
TGTGCATTTCATTTCTGTTCATAATTTCTGACTGGATCAA

CGAAATGAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTGCGACATTCTTTGNTTAGCTCTGTACCC
CATTTCTTAATAGGGATATTGGGTACTTTGCAGTGTAACTTCTTGAGTTC
TTTGTATATGTTGGTTATTATCTCTCTATCAGATGTAAGATTGGTAAAGA
TCTTTTCCCAATCTATTGGTTGCCTTTTTGTCTTATTGACAGTGTCCTTT
GCCTTACTTATTTAAGTTTTGCAATTTTATGAGGTCCCATTTGTCAATCT
TATGAGGTCCCATAAGCCATTGGCGTTCCTCCTTTTAAANNNCCCCCTGC
GCCCAAGGGCCCCAGGGCCTTTCTCATTTTCTTTTCTATTAGTTTCAGTG
TCTCTAGTTTTACGCTGAGGTTCTTGATCCCCTTGTACTTGATCTTTGTA
CGGCGAGATAACATTGGACCATTTCCTTTTTTCTACTTGCTACCTCCAAT
CGACCCCTTTCCCCTACACTGTGCACCCTCGCTCCTACTTTGCTTCTTTG
CCCTTCCCGATTGTTACTGTCCCCCCACCCCTCTTTTCCCTTCCTTTTTT
CCCTTTCCCCCCCCATTTTACTCCTTCCTCCCCCCTCTTTCCTTATATCT
TCTATAACTTTTTTTTTTTTTTTTTTTCCCTCCGCCCTTACCATTCTTTT
TTTACCCCCAAAACTTTCGCCTCCCTATTCCCCTTTCTCTATTATACTTT
TTCT

Query= MSMg01no446_b14.b1 MSMg01no446_b14.b1 CHROMAT_FILE:
MSMg01no446_b14.b1 PHD_FILE: MSMg01no446_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:31 2005
         (569 letters)



>mm_chrX_48489043_48490008
          Length = 966

 Score =  905 bits (468), Expect = 0.0
 Identities = 530/566 (93%), Gaps = 26/566 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccattattatc-tctggtgatcaccaacaattgattgttaggtccattcttgctt 63
           ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gaattccattattgtcatatggtgatcaccaacaattgattgttaggtccattcttgctt 786

                                                                       
Query: 64  attcctcagaatattccaaattgccttgtttgggaggtgtcaggcagcctgcctacagaa 123
           |||||||||||||||||||                      |||||||||||||||||||
Sbjct: 785 attcctcagaatattccaa----------------------aggcagcctgcctacagaa 748

                                                                       
Query: 124 gcagtcgtttgctcatttcctatgctgatctgagtttgggtactctgttgtaattcctag 183
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gcagtcgtttgctcgtttcctatgctgatctgagtttgggtactctgttgtaattcctag 688

                                                                       
Query: 184 gcctctattgcaccttctccttccaccaaagaatggtcaatctgaactgtgatttgcccc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcctctattgcaccttctccttccaccaaagaatggtcaatctgaactgtgatttgcccc 628

                                                                       
Query: 244 ttatagtcactgtagtctacttatcatttgcctttctgactagctttaatgtttcttttt 303
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 627 ttatagtcactgtagtctacttatcatttgcctacctgactagctttaatgtttcttttt 568

                                                                       
Query: 304 tccctaaggcatctctaattttaatgtcaacaaaaagaccagggggagttgaggacagtt 363
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tccctaaggcatctataatttaaatgtcaacaaaaagaccagggggagttgaggacagtt 508

                                                                       
Query: 364 gtttccttttaaaccttcaactttttccctcagctctctcaagcgcaaaggtggcttatt 423
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtttccttttaaac---caactttttccctcagctctctcaagcgcaaaggtggcttatt 451

                                                                       
Query: 424 tttaacaatcatgagtagataaacactactatcatttttcatttgtttataaagataggt 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 450 tttaacaatcatgagtagataaacactactatcatttttcatttgtttataaagatagct 391

                                                                       
Query: 484 catacttgttgaggtaccatctacctggtctggagactatatgggtcttctgcagcatgc 543
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 390 catacttgttgaggtaccatctaactggtctggagactatatgggtcttctgcagcatgc 331

                                     
Query: 544 cttttgactacttctgtcccttaaga 569
           |||||||||| |||||||||||||||
Sbjct: 330 cttttgactatttctgtcccttaaga 305


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 966
Length adjustment: 10
Effective length of query: 559
Effective length of database: 956
Effective search space:   534404
Effective search space used:   534404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)