XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCCTGTTTACAGGAGGTGGGACTTGATGCATTAGGGACTAATAAGACATC
ACTGACATTACCGTTAGGCGAAGAAGGTTTGGAGCCCTCTTTGTCTGATG
GGGCCTGTTGCTTGACAAGAGAGTTCTTCTCCAAAATGCTTTGGAGGAGA
ATTGGAAAGAATACAGTTATGTAGGGTAGGGAACAAACTTTTGAACTCCT
TCTGGAAGAGGAGGCATTTATGAATTTCTTTTAAGCACACGTGGGAAGTC
TATGGGATGCCTGGTTAGATGTGCAATGTCCCATAGAGTCTTGGAAACTT
TGCGTTAGTTCTCAAAACTTTTTGGTGCATAAGGACCTGCCCTGAGAATT
TGAAGATCCCAGATCTCCTTGGTTAGATTGGGAAGGGTGTAGGGAACCTT
GAATGTGTGGAAAAATTACCTGTCCATGTTGTCCAGCAGACGATGGCCCA
GGCACTGTGTTATCTTATTTGAATTTGTGACTGGTATCTCCAGCCCTGTG
TTTGGAAGATGCTGCAGGCACTCCGGCACCCGACTGGTCAAAATCCTTAG
GTTCTTCAAACCCAGCGTACATAGGCTGTTTTCTTTTCACCTGTCTATGC
TTGGACACCGCAGATGAGGTCTCTCATTTTCTGGTTGAAGGGTGGTATAA
AGATTGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCAGAAATTCACTCAATTGCTGATGGTGTGTTCATCATTGAATATACAG
ACTCCTGAAATAAGTCATACAAAATATGCTTCATTATATACTAGACAATT
AGTGTCATTCTGTTTGGCAATACAACATGCATGATTATGCCTCAGAATCA
TGAGCAACTTGGCCATATGGGAAATATAATTAGTGTATTTCTGCTGACTG
AAGATCAGATGGGTTGAGTGTTATCATGTGTGCTGTTGATGAGAGGAAGC
AGCATATTTGTTGTTTATAGATCAGAGAGGAACATCCAAGGAGGACACTA
TGTAAGGAACCCTAGGAAGAGCACCATCACTGCTTTTAGCTAGTAGACAT
ATTTTTAGAATCCCCACTTTCTAGGGTGGAAAAGAAAACTGTATTACTCT
AATTTACTAAGTATGGTCATTTGATACATCAGTGATCATCACCAAGGTGA
ACAGGTGTTGACAGAAGTTTGGGGACTCAGAAGAAGCCTGTTCTGGGAAA
ACCCATTGCCTTCAAAGTACGGAGATTTCTGACCAGCAACACAGGATGAA
CAGTCTACATTGGCTGCAGTAGCCCCATTGTGTCCCAATTAGTGCTTTTC
ACACCATGGAATTTGACTCCTTTGAGTGTTCAAACAACCCTTTCACAACT
GTCACATAATCATATATCTTTGTTTATAAGACATATACTTTTACA

Query= MSMg01no446_k16.b1 MSMg01no446_k16.b1 CHROMAT_FILE:
MSMg01no446_k16.b1 PHD_FILE: MSMg01no446_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:16 2005
         (512 letters)



>mm_chrX_121321751_121322662
          Length = 912

 Score =  308 bits (159), Expect = 8e-88
 Identities = 386/495 (77%), Gaps = 73/495 (14%)
 Strand = Plus / Plus

                                                                       
Query: 80  gaagaaggtttggagccctctttgtctgatggggcctgttg--------cttgacaaga- 130
           |||| ||||||||| ||||| ||||||||||||||||||||        |||||| ||| 
Sbjct: 229 gaaggaggtttggatccctccttgtctgatggggcctgttgtaggtccccttgaccagag 288

                                                                       
Query: 131 gagttcttctccaaaatgctttggaggagaattggaaagaatacagttatgtagggtagg 190
           ||| |||| ||||| ||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 289 gag-tcttgtccaacatgctttggtggagaattggaaagattagagttatgtagggtagg 347

                                                                       
Query: 191 g---aacaaacttt-tgaactccttctggaagaggaggcatttatgaattt-cttttaag 245
           |   |||   ||||  ||||||||||||||||||||||||| ||||| ||| ||||| ||
Sbjct: 348 gggtaac---ctttgggaactccttctggaagaggaggcatgtatgagtttcctttt-ag 403

                                                                       
Query: 246 cacacgtgggaagtctatgggatgcctggttagatgtgcaatgtcccatagagtcttgga 305
           ||||  ||| |||||| ||||||||||||  ||||||| ||||||||||||| |||||||
Sbjct: 404 cacaattggaaagtctttgggatgcctgggcagatgtggaatgtcccatagactcttgga 463

                                                                       
Query: 306 aact-t-tgcgttagttctcaaaactttttgg--tgcataagga-----cctg------- 349
           || | | || ||||||||| | ||| | ||||  || ||| |||     ||||       
Sbjct: 464 aa-tatctg-gttagttct-agaacatcttgggttg-atagggacagtccctgagcatgt 519

                                                                       
Query: 350 ------------------ccctgagaat-ttg-----------aagatcccagatctcct 379
                             ||||||| || |||           |||||||||||||||||
Sbjct: 520 tgggttgatagggagagtccctgagcatcttggggagaagtgaaagatcccagatctcct 579

                                                                       
Query: 380 tggttagattgggaagggtgt-agggaaccttgaatgtgtggaaaaattacctgtccatg 438
           ||| ||||| ||||||||||| | |||||||||||| |||||  ||||||||||||||||
Sbjct: 580 tggctagatcgggaagggtgtga-ggaaccttgaatttgtggggaaattacctgtccatg 638

                                                                       
Query: 439 ttgtccagcagacgatggcccaggcactgtgttatcttatttgaa-tttgtgactggtat 497
           |||||||||||| ||||||||||||||| ||| ||||| |||||| ||| ||||||| ||
Sbjct: 639 ttgtccagcagaagatggcccaggcactttgtgatcttctttgaacttt-tgactggaat 697

                          
Query: 498 ctccagccctgtgtt 512
           ||||||||| |||||
Sbjct: 698 ctccagccccgtgtt 712


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)