NNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTGAAGTCTTGCCCAATAACACTAAATCACAGTCCAGGA
ATATTCATTATTACTAAGTAACCAAGCCAACTGACCAGGTTTCTAGAGAT
TGTCAATATCTTCTCAGAAAAATAAAATGGCAAAAATGTTTAAACCCCTA
TAAGTGACCAGTCAGACATAATTTTCACTGTAGACCTATAAATAGCCACA
TAAAATGACTGCAGTCCATAACTGTGAAATTAGAAATATTCCACAAGTTT
AGAAACTAACTGTCAAAACTTACCTGCAAAGACTGAAAGACATATGTATG
TTGCTCCTTCAAATTCTCTGAAAATTATGCAAAGGTATAAGAATAACCAA
ATTCTGTTCTTCAGAGCCTGGAGGGTAGTGGTTCTCATCTTTCCTAGTGG
TACAATTCTTTGATACAGTTCCTCATGTTGTGATGATTTTCCAACCATAC
AATTTTTTGTTGATAATTTAAAACCGTAATTTTGCTACTGTTATGGATTA
TAATTTAAATATCTGTTATGCAGGGTATCTGACATACCACCCAGGGGTTC
AGGTCGTGACCCACAGGTTGAGAACCATGATTGTAGGGGCTCCAGTGCCC
TGAGCACTTTGATTCGCTTACCACAAATTATTGATTTTCCCAGAAAATTG
CCTCAACCACCTCACTAAGACTGGACAAATGTCTGTCACCTCACAAAGAA
AAAAAN

NNNNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTATCTTTGTACCTC
ATTTTTAAAATTGAGTTATTTGGTTTTTGGAGTCTAACTTTTTGAGCTTG
TTCTATATTTTGAATATTAGCCCTCTATACAGAGGATGTAGCATTAGTGA
GGATCTTTTCTCAATCTGTTGTGTGCCATTTCATCCTATTAACAGTGTCC
TTTGCCTTACAGAAGCTTTGCAGTTTCATGAAGTCCCATTTATCAACTGT
TGATCTTGAGGCCTGAAGTATTGGAGTTATGTTTTTTAAATTGTCTCCTA
TACCAATGAGTTCAAAGCTCTTTCTCACTTTATCTTCTATTAGGTTTAAT
GTATCTGTTTATATATTGAGGTCCTTTAATCCACTTGGACTTAAGTTTGT
GCAGGGTAATAGTAAATATGGATCTATTTGCATACTTCTTCATGCAGACA
CCCAGCTAGACCAGCATCATTGGATGGAGATGTTTTCTTTTTTCCATTGT
ATGGNTTTGGGGTCTTTGGTGAAAATCCAGGGTCCCTAGATTTGGGGGGA
TATTTTAAGGCCTCCATTCCATTGATCAACCCGGCTTTTTGGACCATGGC
GAGGGGATTTTTATAAAACCCTGTTTTTTTTTCACTCTGGGGACCGGGAA
GGGAATCCCCAAAAAAAATCTTCTTATTTATTTAAACGATCTGTTCTACG
CACAGCTTCTTTTTTTTTCN

Query= MSMg01no449_c24.b1 MSMg01no449_c24.b1 CHROMAT_FILE:
MSMg01no449_c24.b1 PHD_FILE: MSMg01no449_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:44 2005
         (571 letters)



>mm_chrX_129577395_129578365
          Length = 971

 Score = 1060 bits (548), Expect = 0.0
 Identities = 563/568 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctgaagtcttgcccaataacactaaatcacagtccaggaatattcattattac 63
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgaagtctaggccaataacactaaatcacagtccaggaatattcattattac 263

                                                                       
Query: 64  taagtaaccaagccaactgaccaggtttctagagattgtcaatatcttctcagaaaaata 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taagtaaccaagccaactgaccaggtttctagagattgtcaatatcttctcagaaaaata 323

                                                                       
Query: 124 aaatggcaaaaatgtttaaacccctataagtgaccagtcagacataattttcactgtaga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatggcaaaaatgtttaaacccctataagtgaccagtcagacataattttcactgtaga 383

                                                                       
Query: 184 cctataaatagccacataaaatgactgcagtccataactgtgaaattagaaatattccac 243
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctataaacagccacataaaatgactgcagtccataactgtgaaattagaaatattccac 443

                                                                       
Query: 244 aagtttagaaactaactgtcaaaacttacctgcaaagactgaaagacatatgtatgttgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagtttagaaactaactgtcaaaacttacctgcaaagactgaaagacatatgtatgttgc 503

                                                                       
Query: 304 tccttcaaattctctgaaaattatgcaaaggtataagaataaccaaattctgttcttcag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccttcaaattctctgaaaattatgcaaaggtataagaataaccaaattctgttcttcag 563

                                                                       
Query: 364 agcctggagggtagtggttctcatctttcctagtggtacaattctttgatacagttcctc 423
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 agcctggagggtagtggttctcatctttcctagtggtacgattctttgatacagttcctc 623

                                                                       
Query: 424 atgttgtgatgattttccaaccatacaattttttgttgataatttaaaaccgtaattttg 483
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 624 atgttgtgatgattttccaaccatacaaatttttgttgataatttaaaaccgtaattttg 683

                                                                       
Query: 484 ctactgttatggattataatttaaatatctgttatgcagggtatctgacataccacccag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctactgttatggattataatttaaatatctgttatgcagggtatctgacataccacccag 743

                                       
Query: 544 gggttcaggtcgtgacccacaggttgag 571
           ||||||||||||||||||||||||||||
Sbjct: 744 gggttcaggtcgtgacccacaggttgag 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)