Query= MSMg01no449_i21.b1 MSMg01no449_i21.b1 CHROMAT_FILE:
MSMg01no449_i21.b1 PHD_FILE: MSMg01no449_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:12 2005
(354 letters)
>mm_chrX_154374712_154375466
Length = 755
Score = 673 bits (348), Expect = 0.0
Identities = 353/355 (99%), Gaps = 1/355 (0%)
Strand = Plus / Plus
Query: 1 cattcaggtccttgcctttgtaccacaaacccagaatgtcatcaggccggttacttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcaggtccttgcctttgtaccacaaacccagaatgtcatcaggccggttacttttta 260
Query: 61 aaagctcattcccaatttctaattattttgaaaacatagaagacttgaaacaatactgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagctcattcccaatttctaattattttgaaaacatagaagacttgaaacaatactgga 320
Query: 121 attttttttt-agcccacaaaaaatttgccataggctaaaattcaagataagataatatt 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttttttttagcccacaaaaaatttgccataggctaaaattcaagataagataatatt 380
Query: 180 tcatggagtataccattatttaatgaactaacgatactgttagggattcacctgagttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatggagtataccattatttaatgaactaacgatactgttagggattcacctgagttat 440
Query: 240 gaaccttattcanaaatacagtatatttcaaagtatttttaggaagtggcaaaattacta 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaccttattcaaaaatacagtatatttcaaagtatttttaggaagtggcaaaattacta 500
Query: 300 tattagaccatctgtatgtaacaattctgaaaggattataaatcactactttaat 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattagaccatctgtatgtaacaattctgaaaggattataaatcactactttaat 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 755
Length adjustment: 9
Effective length of query: 345
Effective length of database: 746
Effective search space: 257370
Effective search space used: 257370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_i21.g1 MSMg01no449_i21.g1 CHROMAT_FILE:
MSMg01no449_i21.g1 PHD_FILE: MSMg01no449_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:12 2005
(253 letters)
>mm_chrX_154564190_154564842
Length = 653
Score = 489 bits (253), Expect = e-143
Identities = 253/253 (100%)
Strand = Plus / Minus
Query: 1 aaaattttagaataattattttcatatatcttgaatttggcagaaatttcaagaatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaaattttagaataattattttcatatatcttgaatttggcagaaatttcaagaatttta 394
Query: 61 aaaaatcataagggtaaagtaagagattgtttctcatcaatgatgtgtgatcttatatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaaaatcataagggtaaagtaagagattgtttctcatcaatgatgtgtgatcttatatga 334
Query: 121 attatttctgaaaattatttggtagataaacattttatggtattaagtatggagtcatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 attatttctgaaaattatttggtagataaacattttatggtattaagtatggagtcatga 274
Query: 181 atgggaaaaaagtttagtctttttttctatttacctcttactattattttttatttattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atgggaaaaaagtttagtctttttttctatttacctcttactattattttttatttattc 214
Query: 241 actttacatcctg 253
|||||||||||||
Sbjct: 213 actttacatcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
