Query= MSMg01no449_p18.b1 MSMg01no449_p18.b1 CHROMAT_FILE:
MSMg01no449_p18.b1 PHD_FILE: MSMg01no449_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:45 2005
(492 letters)
>mm_chrX_49678886_49679782
Length = 897
Score = 903 bits (467), Expect = 0.0
Identities = 488/499 (97%), Gaps = 9/499 (1%)
Strand = Plus / Plus
Query: 1 aattcaccaccat--ttccttataagactttggtcccagaagaacacttaagcacaggac 58
||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 201 aattcaccaccatgatt--ttataagattttggtcccagaagaacacttaagcactggac 258
Query: 59 tcttcagtgtgccccctggcatgcttagttgggttcagcatctaccaaatgattgactac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcttcagtgtgccccctggcatgcttagttgggttcagcatctaccaaatgattgactac 318
Query: 119 tgccttatggcatttttttttctttctgtattttaacaggtttgaatggcaaggtcaact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgccttatggcatttttttttctttctgtattttaacaggtttgaatggcaaggtcaact 378
Query: 179 aggggatgaaggaatgtgaaatggaacttctggcatttttcaatagagaaggaatttgaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aggggatgaaggaatgtgaaatggaacttctggcatttttcaatagagaaggaatttgaa 438
Query: 239 ctctgcttttggtaactacttaggcacc-----ccccccccttttcagaactagcagctg 293
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 ctctgcttttggtaactacttaggcacctccccccccccccttttcagaactagcagctg 498
Query: 294 aactagggttctgtgcatgtactccacccctgatgataccaatagcccttgctcagaaca 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aactagggttctgtgcatgtactccacccctgatgataccaatagcccttgctcagaaca 558
Query: 354 ctttaaaagaatattatgagcaatacacttcaaataaagcttaaccagtaagacactgaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctttaaaagaatattatgagcaatacacttcaaataaagcttaaccagtaagacactgaa 618
Query: 414 tgaatcattatcttgttggaatcctctactaaacagtcttttagcaaaatctagtcactt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgaatcattatcttgttggaatcctctactaaacagtcttttagcaaaatctagtcactt 678
Query: 474 tgcatttattatgtattga 492
|||||||||||||||||||
Sbjct: 679 tgcatttattatgtattga 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 897
Length adjustment: 10
Effective length of query: 482
Effective length of database: 887
Effective search space: 427534
Effective search space used: 427534
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_p18.g1 MSMg01no449_p18.g1 CHROMAT_FILE:
MSMg01no449_p18.g1 PHD_FILE: MSMg01no449_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:45 2005
(246 letters)
>mm_chrX_49832381_49833026
Length = 646
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Minus
Query: 1 cgttcacaacttatctcaacaaaagctctgccaagatttcactatgcttctcttgaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cgttcacaacttatctcaacaaaagctctgccaagatttcactatgcttctcttgaacac 387
Query: 61 ctcagcttatctgtcattgacctaatctgtattgcgattgtactctaaggggaaataaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 386 ctcagcttatctgtcattgacctaatctgtattgcgattgtactctaagggaaaataaca 327
Query: 121 ccgctgtcgtttaagtgcctgacatgtttgtgttatgttgaggatgataccggtgtgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccgctgtcgtttaagtgcctgacatgtttgtgttatgttgaggatgataccggtgtgaga 267
Query: 181 gaagagactatcaggtagatatgcaagcagcctaggaaagtttttttaaagagacatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaagagactatcaggtagatatgcaagcagcctaggaaagtttttttaaagagacatcct 207
Query: 241 gagtcc 246
||||||
Sbjct: 206 gagtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
