GGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAATGAATTTGAAGGCACAACATACCCAAATTTATGGGACACA
ATGGAAGCAGTGCTAAGAGAAAAGTTCAAAATATTATGAGCCTCCATAAA
GAAATTAGAAAGTTCCCATACCAGCAATTTAAAAGTACACCTGAAAGCTG
TAGGAAAAAAAAATAAGAAGCAAGGACACATAACAGAAGTAGAGGGTAGG
AAATAATAAAAATCAGGGCTGAAATCAATCTGTTAGAAACAAATAAAACA
GTACAAAGAATCAACAAAACCAAGAGCTGGTTCTTTGAGAAAATTAGCAA
GTTAGCCAAAACTTTAGCCAAACTAACCAAAAGACAGAGAGACAATACCT
GAATAAACAAAATCAGAAATGCAAGTGGAGATCTAACAAGAGACACTGAA
CAAATTCAAAGAATCATGAGATCTTGCTTCAATAACCTGTATTCATCCAA
AAGGGAAAACCTTAATGAAATGGATGATTGTCTAGACAGATATCACATAT
CAAAGTTAAATCAAGATCAGCTAAACTATTTAAACAGCCCTATAACCCTT
AAAGAATTAGAAGCAGTCATCAAAAGTCTCTCAACCAAAAAGCCCAGGGC
CATATGGTTTTAGTGCACAATTCTATATGATATTCAAAGAAGAGCTAATT
CTAACACTCCTCAAACTATTTCACAAAATAGAAACCGAGGGTCTACTG

NNCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAACCTGAAGAGAGCAGAGT
GAGAAATTGTTCAGGAGAATGCAGGTTCTCTCAGAGGGAAACAAAGTGCT
ATGAATATGTGAGTGCAGCTTTGCACAGAGGCCATTGTGCCTGTGAGTTC
ATGTTCCTGCTGAGGACAGATTGCAATGGAGACAAAAGTGTAGGTGCCTG
CTGATGTCTCAAGTTGAGGATTAACCTGTTAGTGCAGGTGACTGCAGGGG
CCAGGGAAGGGACCTGGGCAAATAAGTGCAGGAGCCTTCAGAAGACTAGG
TTATGTGGGGACAGTGGGCTATACACAGACAAGCTGGTCTCCAGTTGAGT
TGAGGTCTGAACTCTAGTAGAACCTGATGGGTGGCAATTCCCACCTACAT
GGGACAGAAGGTGTTCCCTCATATCTTCTGGCCCCCTGGCTCCTGTTGAA
TTTACCACCCCCACATACCCCACAAGAGAGGATAGTGGCTAGCAGTCATG
TACACAATGTCCCAAGCTTCTGACCTTCAGGCTAGACTTCTCCCAGTTAC
CTAGCAACAACAAGATAACAAGTCCACTATAAGAGGGGCTGCTTGGCCCA
CTCCTCACTCTTTTAAGCTTTTACTTTCTTTAGTCTCTCTCTAAGCCCTC
TCTCTCTAAGCCTTCACTTTTCTTACTCTCTAACTCTCTTTCTCTCTTTN

Query= MSMg01no451_c12.g1 MSMg01no451_c12.g1 CHROMAT_FILE:
MSMg01no451_c12.g1 PHD_FILE: MSMg01no451_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:18 2005
         (669 letters)



>mm_chrX_4255553_4256621
          Length = 1069

 Score = 1075 bits (556), Expect = 0.0
 Identities = 655/722 (90%), Gaps = 53/722 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaacctgaagagagcagagtgagaaattgttcaggagaatgcaggttctctcagaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaacctgaagagagcagagtgagaaattgttcaggagaatgcaggttctctcagaggg 260

                                                                       
Query: 61  aaacaaagtgctatgaatatgtgagtgcagctttgcacagaggccattgtgcctgtgagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaaagtgctatgaatatgtgagtgcagctttgcacagaggccattgtgcctgtgagt 320

                                                                       
Query: 121 tcatgttcctgctgaggacagattgcaatggagacaaaagtgtaggtgcctgctgatgtc 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 tcatgttcctgctgaggacagattgcaatggagaaaaaagtgtaggtgcctgctgatgtc 380

                                                                       
Query: 181 tcaagttgaggattaacctgttagtgcaggtgactgcaggggccagggaagggacctggg 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgagttgaggattaacctgttagtgcaggtgactgcaggggccagggaagggacctggg 440

                                                                       
Query: 241 caaataagtgcaggagccttcagaagactaggttatgtggggacagtgggctatacacag 300
           ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 441 caaataagtgcagtagccttcagaagacttggttatgtggggacattgggctaaacacag 500

                                                                       
Query: 301 acaagctggtctccagttgagttgaggtctgaactctagtagaacctgatgggtggcaat 360
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 acaagttggtctccagttgagttgaggtctgaactctagtagaacctgatgggtggaaat 560

                                                                       
Query: 361 tcccacctacatgggacagaaggtgttccctcatatcttctggccccctggctcctgttg 420
           ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct: 561 tcccacctacatgggacagaaggcgttcccttatgtcttctggccccctggctcctgttg 620

                                                                       
Query: 421 aatttaccacccccacataccccacaagagaggatagtggctagcagtcatgtacacaat 480
           || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagttaccacccccacattccccacaagagaggatagtggctagcagtcatgtacacaat 680

                                                                       
Query: 481 gtcccaagcttctgaccttcaggctagacttctcccagttacctagcaacaacaagataa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcccaagcttctgaccttcaggctagacttctcccagttacctagcaacaacaagataa 740

                                                                       
Query: 541 caagtccactataagaggggctgcttggcccactcctcactct----------------- 583
           |||||||||||||||||||||||||||||||||||||||||||                 
Sbjct: 741 caagtccactataagaggggctgcttggcccactcctcactctcttaagcttttactttc 800

                                                                       
Query: 584 ----------------------------------tttaagcttttactttctttagtctc 609
                                             ||||||||||||||||||||||||||
Sbjct: 801 tttactctccctcttactctctctctcttactcttttaagcttttactttctttagtctc 860

                                                                       
Query: 610 tctctaagccctctctctct--aagccttcacttttcttactctctaactctctttctct 667
           ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||
Sbjct: 861 tctctaagccctctctctctctaagccttcacttttcttacactctaactctctttctct 920

             
Query: 668 ct 669
           ||
Sbjct: 921 ct 922


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)