Query= MSMg01no455_c06.b1 MSMg01no455_c06.b1 CHROMAT_FILE:
MSMg01no455_c06.b1 PHD_FILE: MSMg01no455_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:34 2005
(624 letters)
>mm_chrX_35557810_35558833
Length = 1024
Score = 1133 bits (586), Expect = 0.0
Identities = 613/622 (98%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 1 gtctggaaccagcagttatgagtaaaagtgtttctcctcctcttctgacttatctgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctggaaccagcagttatgagtaaaagtgtttctcctcctcttctgacttatctgaact 260
Query: 61 taaagtcacttaacctcgccattattttgtcatcacaacttgacaaattgcagtggcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagtcacttaacctcgccattattttgtcatcacaacttgacaaattgcagtggcaag 320
Query: 121 agtgttttattgatgtataagtgctcagaaaataatggttgttattgaaaagtagacaga 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agtgttttattgatgtataagtgctcagaaaataatggtagttattgaaaagtagacaga 380
Query: 181 caggcttataatctcagcacttgggaggctaaggcaggagggtcatgagttcaaggccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggcttataatctcagcacttgggaggctaaggcaggagggtcatgagttcaaggccag 440
Query: 241 cctgactataacgtgagaccatgcctcaaagaaacaaatgaaaagggagaaaaaa-gagg 299
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||
Sbjct: 441 cctgactataacgtgagaccatgcctcaaacaaacaaatgaaaagagagaaaaaaagagg 500
Query: 300 cttctataatcattgatattcttattacaaacccagaatggagtggggtttattttgaag 359
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 cttctataatcattgatattcttattacaagcccagaatggagtggggtttattttgaaa 560
Query: 360 gtaaaaacatagatgctctttaatttttaaatatatacatatatgtccatatttacacac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaaaaacatagatgctctttaatttttaaatatatacatatatgtccatatttacacac 620
Query: 420 atgtatgaatacacattttatttgtgagtgtgcatgcacacaggtatgcaatgggtattc 479
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 atgtatgcatacacattttatttgtgagtgtgcatgcacacaggtatgcaatgggtatgc 680
Query: 480 agattagcacttgtggaaactgcttctccacggggtgactaaattatagtcccttctctg 539
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 agattagcacttgtggaaactgcttctccacggggtgactaaattatagccccttctctg 740
Query: 540 ggttacttgggttaagtgtccttttctcccatcacttatctacttttttgtcatgactgc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggttacttgggttaagtgtccttttctcccatcacttatctacttttttgtcatgactgc 800
Query: 600 tgtcctctgacgcatcccttaa 621
||||||||||||||||||||||
Sbjct: 801 tgtcctctgacgcatcccttaa 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_c06.g1 MSMg01no455_c06.g1 CHROMAT_FILE:
MSMg01no455_c06.g1 PHD_FILE: MSMg01no455_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:34 2005
(581 letters)
>mm_chrX_35706426_35707406
Length = 981
Score = 818 bits (423), Expect = 0.0
Identities = 445/465 (95%), Gaps = 20/465 (4%)
Strand = Plus / Minus
Query: 1 caaactgataatgtcaaaggtattatcatcatgttaaatacctaacagggaatccaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaactgataatgtcaaaggtattatcatcatgttaaatacctaacagggaatccaagag 386
Query: 61 tggctgggtataagtaactcagttgtggtttagtataaatagacctttcagtgtaattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggctgggtataagtaactcagttgtggtttagtataaatagacctttcagtgtaattca 326
Query: 121 tagcaaaatgaattaaaggatgatatattagggtagtattgacaacatactttaaaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagcaaaatgaattaaaggatgatatattagggtagtattgacaacatactttaaaagct 266
Query: 181 ttcataaaatctaccaggtacttttaataagaacacaaagcacgagtaagaattatctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcataaaatctaccaggtacttttaataagaacacaaagcacgagtaagaattatctac 206
Query: 241 ttacctaagatgatagaaacgctattaccctgatttgttcattgtgcaaggtgtacatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttacctaagatgatagaaacgctattaccctgatttgttcattgtgcaaggtgtacatga 146
Query: 301 accaaatcattttactgtgcctgataaatatgggcaaatatcatgtttcagtaaaaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 accaaatcattttactgtgcctgataaatatgggcaaatatcatgtttcagtaaaa---- 90
Query: 361 aaaaaaaaaaaaaaacaaaaaaaaaacagcattagttcttaaatcttaaaaagaaagaaa 420
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ----------------aaaaaaaaaacagcattagttcttaaatcttaaaaagaaagaaa 46
Query: 421 ataagtattccagagtgagacactaaaatgtttacaagatgatca 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 ataagtattccagagtgagacactaaaatgtttacaagatgatca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
