Query= MSMg01no455_f23.b1 MSMg01no455_f23.b1 CHROMAT_FILE:
MSMg01no455_f23.b1 PHD_FILE: MSMg01no455_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:51 2005
(595 letters)
>mm_chrX_142718808_142719799
Length = 992
Score = 1120 bits (579), Expect = 0.0
Identities = 590/595 (99%), Gaps = 3/595 (0%)
Strand = Plus / Plus
Query: 1 gataattacacaaacttcctacattctctgagagacacttggccacagaagtagccactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gataattacacaaacttcctacattctctgagagacacttggccacagaagtagccactg 260
Query: 61 ggctctaaatgaagagtcacacagaccaaattagtgatggaagtgacaaaaaccattttc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ggctctaaatgaagagtcacacagaccaaattagtgatggaagtggcaaaaaccattttc 320
Query: 121 ttcttaagcaagctaacttgttccaaggcacagtgcacctagagttgaggaagtggcatt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttaagcaagctatcttgttccaaggcacagtgcacctagagttgaggaagtggcatt 380
Query: 181 cttgttagagatcaaggaaaataaagtgaggaagtacaagtttgttcatagatgcatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgttagagatcaaggaaaataaagtgaggaagtacaagtttgttcatagatgcatttg 440
Query: 241 gggttgtcaatctgcatgttcttgacatggttgttgttttgttttgtttgttaaaggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttgtcaatctgcatgttcttgacatggttgttgttttgttttgtttgttaaaggaga 500
Query: 301 gaaggacattcatgaactgacaggtactgctatagatactactgttcctcagcagttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaggacattcatgaactgacaggtactgctatagatactactgttcctcagcagttaga 560
Query: 361 tcccaaactatctagctgtatccaacatattttaatgtctttgagaaacaatgttcacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccaaactatctagctgtatccaacatattttaatgtctttgagaaacaatgttcacca 620
Query: 421 atatgttggcaaaggttcttaaacaaagaaaataagaagctcagaaacaaaactcctaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatgttggcaaaggttcttaaacaaagaaaataagaagctcagaaacaaaactcctaag 680
Query: 481 atccatcaccttgtgactctatgtgtcctcaaacaaacaccaacatattgctctgaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccatcaccttgtgactctatgtgtcctcaaacaaacaccaacatattgctctgaagaa 740
Query: 541 acaatacacaaaaagaattaagaagcagaggtttcctaagtgaggtaactcagac 595
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 acaatacacaaaaagaattaag---cagaggtttcctaagtgaggtaactcagac 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 992
Length adjustment: 10
Effective length of query: 585
Effective length of database: 982
Effective search space: 574470
Effective search space used: 574470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_f23.g1 MSMg01no455_f23.g1 CHROMAT_FILE:
MSMg01no455_f23.g1 PHD_FILE: MSMg01no455_f23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:52 2005
(508 letters)
>mm_chrX_142872793_142873700
Length = 908
Score = 959 bits (496), Expect = 0.0
Identities = 505/508 (99%)
Strand = Plus / Minus
Query: 1 ataaaatttgtaggcaaatggatagaacttgaaaatatcatcctgagagagaggtagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ataaaatttgtaggcaaatggatagaacttgaaaatatcatcctgagagagaggtagccc 789
Query: 61 aatcagaaacacacacacagacacacaagatatgcattcactgataagtggatattagcc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aatcagacacacacacacagacacacaagatatgcattcactgataagtggatattagcc 729
Query: 121 ccaaattttggaatacccaataatcaaagaagtggctatgaagaaatagaagattgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ccaaattttggaatacccaataatcaaagaagtggctatgaagaaatagaagattgttgc 669
Query: 181 tgttttgactttcaatataaattacatttttggaatattatttttggtaagtagaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgttttgactttcaatataaattacatttttggaatattatttttggtaagtagaaatat 609
Query: 241 tgagtaccctgtaaatcctgaggaatgcttagcctctgtacacaaaagaaaacctaaata 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tgagtacccggtaaatcctgaggaatgcttagcctctgtacacaaaagaaaacctaaata 549
Query: 301 aatcataaaatctatactaattttctaaggcataaaccattgacagtgaccttcaggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 548 aatcataaaatctatactaattttctaaggcataaaccattgacagtgaccttcagggtt 489
Query: 361 gctgacatgatagaattgctatttcacgctaatttattattaattcacacaattatgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gctgacatgatagaattgctatttcacgctaatttattattaattcacacaattatgtgc 429
Query: 421 gacactaacacaaaagttagattttgataccaaattctaatgggacaacttggaaaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gacactaacacaaaagttagattttgataccaaattctaatgggacaacttggaaaatat 369
Query: 481 aaattgtaataccaccttgatcctgaaa 508
||||||||||||||||||||||||||||
Sbjct: 368 aaattgtaataccaccttgatcctgaaa 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
