ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGTTCTTTCCCGTCTTCTTTTAGGTTTGTGGAAGGATTACTTTCTTAC
TTTTTTAAGGGTGTAATTTCTGTCATTGTGTTGGTGTCTTCCCTTTATTA
TCCTTTGAAGGTCTCAATTTCTGCAAATATATTTGTGAATTTGGTTTTGT
CATAGAATACTTTGGTTTCTCCATCTATTGTAATGGAGAGTTTTGCTGGG
TTTAGTAGACTGGGCTGACATTTGTGTTTTCTTGGGTCTGTGTAACATCT
GTCCAGGATCTTCTGTCTTTCATAGTCTTTGGTGATAAGTCTGGTGTAAT
TCTAATAGGTCTGCCTTTATATGTTACTTGATATTTTTCCCTTACCACTT
TTAATATTCTGCCTTTATTTAGGGCATTTGTTGTTCTAATTATTATGTGT
TGGGTGGAATTTCTTTTCCTAATTATTCACTTGGAGTCTTGTACCCTTCT
TGTAAGTTCATGAACTCCCCCTTCTTTACTTTATTTTTTACTTCCACTTT
CCTTCTTCTCCCCTTCTTTTTTTAGCATTTTTCCTACCCCCTCTTTTCCT
TTTTTTCACGTTCCTCACCATATCTCTCACTCCTCCTTTTTATTTTTTTT
TCCCCTATCCTCCTTAATTGCTTTTCCCACCTACATCTTTGATATTCCCT
CTTTTTTTTTACCACTCTTTTTTTTCTTATCTTTCCCTCTCATACCTTCC
CTTTGTCTCCTTTTACTTATTCN

TCTCTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACATACTCAGAAAGGACT
GGAAGAGAGTTAACACTCCTTTAACAATCTTCATTTCCCCAAGGAAGTCA
AAATATAATCAAAGGGATATTTTTTACAAAAAGATTTATAACACATGTGG
GCCAACTGCGTCATTATTTGTCTACAATGACAGATAATAGCATTTTGTAC
TTCTAGAAATTACCTCTGATATTGTTACATTTCAAGAGTTTTTATATGAC
AAGATCATATTCCAAACAGTTCATATGAAGTGAGACACTTGTGAAGAGAA
AAACAAAAAGACAGCAATCATGATTATGCTTTTATTGATAAATCATTTTT
ACTTACTCCAGTTAAAAAAAAATCAATTCAACTGAATTTCAAGACCTTTT
GGCTAAATGCTACTCAATATTTTTCTCATGAATATATGTTAGTTTTCTGT
TATTACTAAACCTCACAATAATTTACTGTTTCTCATTTTACTTTTATGAG
AACAGTAATTTGAAACCCACATAAAATGAACATTCCAACCTGCTTCATAC
TGTCAGTATAACTAAGGAAAGGTAATATGAGGTACTTATAGGACTGTAAT
TTTCTTCATGTTCAGCGAGCATATTTATCTTTTATTGGTTTCTCTGTATT
ACATATTAACAGTAAGGGTACTCTATTTGCCAAGTGTGTGTTCC

Query= MSMg01no456_p22.g1 MSMg01no456_p22.g1 CHROMAT_FILE:
MSMg01no456_p22.g1 PHD_FILE: MSMg01no456_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:01 2005
         (572 letters)



>mm_chrX_84990613_84991584
          Length = 972

 Score = 1075 bits (556), Expect = 0.0
 Identities = 568/572 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacatactcagaaaggactggaagagagttaacactcctttaacaatcttcatttcccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacatactcagaaaggactggaagagagttaacactcctttaacaatcttcatttcccca 260

                                                                       
Query: 61  aggaagtcaaaatataatcaaagggatattttttacaaaaagatttataacacatgtggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaagtcaaaatataatcaaagggatattttttacaaaaagatttataacacatgtggg 320

                                                                       
Query: 121 ccaactgcgtcattatttgtctacaatgacagataatagcattttgtacttctagaaatt 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ccaactgcgtcattatttgtctacaatggcagataatagcattttgtacttctagaaatt 380

                                                                       
Query: 181 acctctgatattgttacatttcaagagtttttatatgacaagatcatattccaaacagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctctgatattgttacatttcaagagtttttatatgacaagatcatattccaaacagtt 440

                                                                       
Query: 241 catatgaagtgagacacttgtgaagagaaaaacaaaaagacagcaatcatgattatgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catatgaagtgagacacttgtgaagagaaaaacaaaaagacagcaatcatgattatgctt 500

                                                                       
Query: 301 ttattgataaatcatttttacttactccagttaaaaaaaaatcaattcaactgaatttca 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 ttattgataaatcatttttacttactccggttaaaaaaaaatcaattcaactgaatttca 560

                                                                       
Query: 361 agaccttttggctaaatgctactcaatatttttctcatgaatatatgttagttttctgtt 420
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agacgttttggctaaatgctactcaatatttttctcatgaatatatgttagttttctgtt 620

                                                                       
Query: 421 attactaaacctcacaataatttactgtttctcattttacttttatgagaacagtaattt 480
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attactaaacctcaaaataatttactgtttctcattttacttttatgagaacagtaattt 680

                                                                       
Query: 481 gaaacccacataaaatgaacattccaacctgcttcatactgtcagtataactaaggaaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaacccacataaaatgaacattccaacctgcttcatactgtcagtataactaaggaaag 740

                                           
Query: 541 gtaatatgaggtacttataggactgtaatttt 572
           ||||||||||||||||||||||||||||||||
Sbjct: 741 gtaatatgaggtacttataggactgtaatttt 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)