TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCATGAAATCCGATATAATATTAAGATAGTATGATTGATATAGCTGGT
TTTCTTAACTCCAAGTATAATTCAATACATGATTTGAAATTCTAGACATC
TAAATATATACTTATATATTTGTTGTTTTGGTTTAACATACAAAGGAACC
TCTGCTATCTGGACTGGTTTGCATGATTTTTGCTTCAGAAATCTATTTTT
ATGTTCTTTAGAGATCTGTTCAACAATCTCTGCTTAAAATGAGATCTCAC
AACCTGAATATATAAAAAATAAAATAAATTTTTGTTTGTCTTTTAAATTA
TTTCAATCTTTGAAGTGGTTCCTAGCTGCTCCTTTCACTACTTATATTGA
ATTTTAATTTCACATATATCCAATGACTCTATGTTTCAGGTGCTTCTTCT
ATGGAACACTGAGTCAACAGTCAATTAATCAGACTTCTAATGAATGCTTT
GCCCATATTTTTTGTACTGGAGTTTAAGTTTCCCTCTTCCTGCATTACTT
TCCCGCATTCTGATACCCTTAACCTTCTTTCTGCCCCCCAAGCTTATTGT
TTTTTTTAAAAATCCCCCACTTACTTCTCTTACATCTTTCTTATGGGGCA
CCTGCCCCCCAAAACAAATTTATCCCCTTAAATTGGTCCGTAATTTCACC
AAATCATATAACTTTTTTTATCTTCCACCTTCCTCTTTTCCCCCTCCCCC
CCTTTACCTCCTTGTCTCACCCTTAAATCACTACCCCCGCAACTTTTTCC
CTTTTTTTTTCCCCCTN

TTCTTTCTTCTCCTCACTTTCGCGATGAXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTATT
AGGTAGGAATTATGACAGTTCCAAACCAAGAGCAGTGTGACTTGTAAATC
AGAAAGGGAAAAAATGTGGTTTTATGCATCCAGGCAAACTATAACCAATC
CATTTAACGCGTAAGGAATACACTTAAAATATAGATGAATACATTCAACA
TTTGAAGCAAGGTAGACACTTGCAATATTTATTTAAGATGTGTGGTGAAA
GCTGACGGAAGAAGGAGTACTGATCTTTTTTCTTCCCACTTTACCCTCTC
TCTCTTTCTTTTTCTTTCCCCTCTTCTTCCATTGCCTCTTCCTTTCCTCT
TACTTCCCCCCTCTTCACCTTTTTTCTCTCTTCCCCCCCCCGATTTCCCT
TTTTCACTTCCCTTTCCCCCACCATCCTATCCGATTTCCCCCTGCCCTCG
ACTTTCCCCCCCTTTCGTTCCCTTTCTTTTTTTTCCGCCTCTTCCGCACT
TCCTT

Query= MSMg01no459_h22.b1 MSMg01no459_h22.b1 CHROMAT_FILE:
MSMg01no459_h22.b1 PHD_FILE: MSMg01no459_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:26 2005
         (400 letters)



>mm_chrX_125923574_125924373
          Length = 800

 Score =  746 bits (386), Expect = 0.0
 Identities = 394/398 (98%), Gaps = 4/398 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatgaaatcc--gatataatattaagatagtatgattgatatagctggttttct 62
           |||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgaaa--caagatataatattaagatagtatgattgatatagctggttttct 262

                                                                       
Query: 63  taactccaagtataattcaatacatgatttgaaattctagacatctaaatatatacttat 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taactccaagtataattcaatacatgatttgaaattctagacatctaaatatatacttat 322

                                                                       
Query: 123 atatttgttgttttggtttaacatacaaaggaacctctgctatctggactggtttgcatg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atatttgttgttttggtttaacatacaaaggaacctctgctatctggactggtttgcatg 382

                                                                       
Query: 183 atttttgcttcagaaatctatttttatgttctttagagatctgttcaacaatctctgctt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atttttgcttcagaaatctatttttatgttctttagagatctgttcaacaatctctgctt 442

                                                                       
Query: 243 aaaatgagatctcacaacctgaatatataaaaaataaaataaatttttgtttgtctttta 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaaatgagatctcacaacctgaatatataaaaaataaaataaatttttgtttgtctttta 502

                                                                       
Query: 303 aattatttcaatctttgaagtggttcctagctgctcctttcactacttatattgaatttt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aattatttcaatctttgaagtggttcctagctgctcctttcactacttatattgaatttt 562

                                                 
Query: 363 aatttcacatatatccaatgactctatgtttcaggtgc 400
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatttcacatatatccaatgactctatgtttcaggtgc 600


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space:   309281
Effective search space used:   309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)