Query= MSMg01no465_f22.b1 MSMg01no465_f22.b1 CHROMAT_FILE:
MSMg01no465_f22.b1 PHD_FILE: MSMg01no465_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:27 2005
(426 letters)
>mm_chrX_157433962_157434787
Length = 826
Score = 775 bits (401), Expect = 0.0
Identities = 417/424 (98%), Gaps = 4/424 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgggtttc--tcgctgctttatcaccccctgtcagtgcctttgtactagaaat 62
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggga--caatcgctgctttatcaccccctgtcagtgcctttgtactagaaat 262
Query: 63 ttcagccgcattgccttggagtcaaaggaaggatggtttatctgaacactctgagaagaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcagccgcattgccttggagtcaaaggaaggatggtttatctgaacactctgagaagaa 322
Query: 123 ggtaaggaaaaaaacgtaacagaatggccacagatgtaagttcaatgtcgttttaagtag 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtaaggaaaaaaccgtaacagaatggccacagatgtaagttcaatgtcgttttaagtag 382
Query: 183 ctgtattagatgttttccaaggagccataccatggacaagcacagcctttcactgaagga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctgtattagatgttttccaaggagccataccatggacaagcacagcctttcactgaagga 442
Query: 243 catttgctttgctctggtttttagtactggtttattggagccacatccagttcagttaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 catttgctttgctctggtttttagtactggtttattggagccacatccagttcagttaat 502
Query: 303 tccctttttgagagaagataagacattctaagtgttttaaagaaataccatgctgtcatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tccctttttgagagaagataagacattctaagtgttttaaagaaataccatgctgtcatt 562
Query: 363 tacctgaggncctttcttctgtaaaaagagcactaatagttccctgcaaatgcctactcc 422
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tacctgaggtcctttcttctgtaaaaagagcactaatagttccctgcaaatgcctactcc 622
Query: 423 atag 426
||||
Sbjct: 623 atag 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_f22.g1 MSMg01no465_f22.g1 CHROMAT_FILE:
MSMg01no465_f22.g1 PHD_FILE: MSMg01no465_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:27 2005
(330 letters)
>mm_chrX_157634463_157635192
Length = 730
Score = 600 bits (310), Expect = e-176
Identities = 325/334 (97%), Gaps = 8/334 (2%)
Strand = Plus / Minus
Query: 1 ctccatacactagagagcctgcaacattagacccaaatcatgtggaagtttacttcctgc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctccataccctagagagcctgcaacattagacccaaatcatgtggaagtttacttcctgc 336
Query: 61 tctctgagatagtctataatgttacacttaattaaagaatcatattgcaagacaacaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tctctgagatagtctataatgttacacttaattaaagaatcatattgcaagacaacaact 276
Query: 121 tcgcacaactgaagactattattacaatcaataacatactagtatataataaaacaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcgcacaactgaagactattattacaatcaataacatactagtatataataaaacaaaga 216
Query: 181 aattattggtttaggaattatttaaattcaaattttatttatatagtttatgtttaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aattattggtttaggaattatttaaattcaaattttatttatatagtttatgtttaaagt 156
Query: 241 actttttt----actgttaaaggcaagtagaaaggtctacaatagaactatttcttaaaa 296
|| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ac----ttaaggactgttaaaggcaagtagaaaggtctacaatagaactatttcttaaaa 100
Query: 297 tactctcataatcttagggaaaaatactgaagca 330
||||||||||||||||||||||||||||||||||
Sbjct: 99 tactctcataatcttagggaaaaatactgaagca 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
