GACTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGC
GGAATTCTCTCCGTATTTCGGATCAGTCACAGTTATTAGCCCTACTGTGC
CATGTTTTGGAAGGCTTTCAGGAACATAGAAGTTATATTCATTATGAGTG
AAAATTGGGCTATTATCATTCTGGTCAAGAACAGTCACAAATACAGTGGC
ATTGGACATTAAGGGTGGAATTCCATTGTCCTGTGCCAAAACTGTAAAGT
AATACTTTTCCTGTTTTTCCCTATCCAGTTTCTTCACTGCAGTCAGGATG
CCAGTACGTTGATCCAGATTGAATTCATTTTTTGCATCAAAACCTAGCAT
GTAGCTTATTTCAGCATTCTGTCCACTGTCTGCATCTGTTGCACTGATTT
TTGTCAACTGTGCACCAGGAGAGTTATTCTCAGGAACAGAAAGGCTTATG
AAAGACTGGGTGAAAACTGGAGCATTGTCATTTTCATCTTTTACTTTGAT
CAGGAGCATGGATGACTGATTCAAAGGAGGTTTGCCAGCATCAGCGGCTA
ATAAATTTATGGCATATTCTCTTGTGGACTTAAAGTCTAGAAATGCAGTA
GCCTCCAAGAGAAAATGATTAATGAATACTGTTCGCTATCTGAAAGAAAC
TTCATGAATCGTGAAGTCTGTCCTCCTTCCTAAATGTCAAAAACTTTTTC
CATCCCTATTATAATACACTATTTAACGTAATTCGCGCTATCCCTCTTAA
ATAATACGTGACTTTTCTTTGATG

NCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAATTTGGGCAGGTCACTGAAACTC
CTTTCCCTCAGTCTCCTCTCCATTTTTGTCCCTCCATTCTTTTGGACAGG
AACTATTTCAGTCAGTTTTTGACTATGGGATGGCAACCCCGTTCCTCCAC
TTGATGTCTTTCTACTGGCGAAGGTCTTTACAATTTCCCTCTCCCCATTG
TAAGGCATTTCATCTAAATTCCCTCCCTTAGAGTCCTGAACATCTTCCAC
CTACCAGCTCTCTGGTACATCCTAGTGTTTCCACTACCTTCTACCTCCAA
AGGTTGCCTATTTCCATTCTTTCTGCTGGGGTTGAGGGCTTCACTCCTGT
TTTCCCACCCCCCAATACCTGACAATGTTCCAATTTTCACATTCCTGTCC
CCTCTCCCACCCAGATCCCTCACTCACTCTTTCTCCCACCCCCATGATTG
CCTCTTTTCCCTCCCAAGTGAGATTGAGGCATCCTCACTTGGGCCCTTCA
GTTTGTTAACATTCTTGCATTCTGTGGATTGTATCCTGGGCATTCTATAT
GTTTTTGGCTAATATCCCCTTATTAGTGAGGAAATACCCATGCTGACCTT
TTGGGTCTGAACTTACTTCACCCAGGAAGGAAATTTTCTAAGTCCCCCTA
TTTGCTTACCAACCTCATGAGGGCCCCCTTCCTAAAAAATTGAAAAGAAT
TCCGCTGTGAAATATTACCCCACTTT

Query= MSMg01no468_j19.b1 MSMg01no468_j19.b1 CHROMAT_FILE:
MSMg01no468_j19.b1 PHD_FILE: MSMg01no468_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:54 2005
         (445 letters)



>mm_chrX_117513610_117514454
          Length = 845

 Score =  822 bits (425), Expect = 0.0
 Identities = 440/445 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtcacagttattagccctactgtgccatgttttggaaggctttcaggaacatagaagtta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtcacagttattagccctactgtgccatgttttggaaggctttcaggaacatagaagtta 586

                                                                       
Query: 61  tattcattatgagtgaaaattgggctattatcattctggtcaagaacagtcacaaataca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tattcattatgagtgaaaattgggctattatcattctggtcaagaacagtcacaaataca 526

                                                                       
Query: 121 gtggcattggacattaagggtggaattccattgtcctgtgccaaaactgtaaagtaatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gtggcattggacattaagggtggaattccattgtcctgtgccaaaactgtaaagtaatac 466

                                                                       
Query: 181 ttttcctgtttttccctatccagtttcttcactgcagtcaggatgccagtacgttgatcc 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttttcctgtttttccctatctagtttcttcactgcagtcaggatgccagtacgttgatcc 406

                                                                       
Query: 241 agattgaattcattttttgcatcaaaacctagcatgtagcttatttcagcattctgtcca 300
           ||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agattgaattcaggtggtgcatcaaaacctagcatgtagcttatttcagcattctgtcca 346

                                                                       
Query: 301 ctgtctgcatctgttgcactgatttttgtcaactgtgcaccaggagagttattctcagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgtctgcatctgttgcactgatttttgtcaactgtgcaccaggagagttattctcagga 286

                                                                       
Query: 361 acagaaaggcttatgaaagactgggtgaaaactggagcattgtcattttcatcttttact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acagaaaggcttatgaaagactgggtgaaaactggagcattgtcattttcatcttttact 226

                                    
Query: 421 ttgatcaggagcatggatgactgat 445
           |||||||||||||||||||||||||
Sbjct: 225 ttgatcaggagcatggatgactgat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space:   363225
Effective search space used:   363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)