CCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTACATATTGCTCCACAGGCAGCAGCAGGAGAATGTGTGCCTTACTA
GGTGTAGCTTGAGCATATATGACCTCAAAGCCTACCTCCACAGTTACACA
CTTCCTTCAACAAGACCACACCTACTCAAACAAGGAAACACCTCCTAATA
GTGCCACCCCCAATGGCCAAACATTCAAGCACATGAGTGTATGGGGGCCT
TACCTATTCAAACCACCACAAATATGTTTTTAACAAGGTGAAGAAAGATC
ACTAGTATTATTATAAACAAAACTGACTTTGTAACAGGGAAAATATATTA
GTGATAAAGATAAATTAATCAGCCAGAAAGTCAGAAAGGATAAAGATTAT
CTCAACAACAGTATATTTAACCTCACATCAGAATTCACATTCTTCTCAAA
TATACGTGGAAAATAAGCCATATTTGGGGGGCATAAAACAAAGATGTATT
TCTATGAATGAACAGATAAATTGTGTTACATCTAGACAGCAGAATATGAT
TCAGTATTAAAAGAANATGAGNCATCAAGCCTAGAAAAGACATAATAGAA
ATATAAATGTATATTACTAAGTGAAAGAACCCCTTCTAGAAAGAGTATAT
ACTGTGCTTTTCAACAAAACAGTTTGGTTATCGACTAGAAAACAAATAGT
AAAAATAAAAGAATTACTGGGGATTATTTAAGTGATTTATAGAAAGGCCC
ACACCCCGGGAATTTTAGGCGTTGGAAATACCCCCCTATCCCCCCC

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGTAGGCTTCTTGTATGTTCATGGGCA
TCTTTTTCTTTAGGTATGGGAAGTTTTCTTCTATAATTTTGTTGAAGATA
TTAGCTGGCCCTTTAAGTTGAAAATCTTCATTCTCATCTACTCCTATTAT
CCGTAGGTTTGGTCTTCTCATTGTGTCCTAGATTTCCTGGATATTTTGAG
TGAGGATCTTTTTGCATTTTGTATTTTATTTGATTGTTGTGCCGATGTTC
TCTATGGAATCTTCTGCACCTGAGATTCTCCCTTCCATCTCTTGTATTCT
GTTGCTGATGCTTGCATCTATAGTTTCAGATTTCTTTCTTAGATTTTCTA
TCTCCAGCATTGCCTCACTTTGGGTTTTCTTTATAATGTCTACTTCCCTT
TTTAAGTCTTTGATGGCTTTATTCAATTCCATCATCTGTTTGCTTGTGTA
TTCTTGCAACACTTTAAGAAATTTTTGTGCTTCCTCATTAAGGCCTTCTA
CCCGTTAAAAAGCGTTCTCCTTGATTTCTTCTATCGAGGTATTTTTTTCT
TTTTCGGGGGCTCTTACCATCCACTTGAGAAACCGTTTTTTTTTTCTTGC
CACTTTTTTTTTTCTGTTTTTGTCCCCCCTTCTACTTTCTCTTCTTTCCT
TTTTCCTTCTTTATTTTCCCGCTTTTTCTTTGTTTTTTCGCTTCTGCTTA
TTTTTCCCAATCTCTTTCTTTTCTTCCCTTTTTTTCCCCACCACTCG

Query= MSMg01no469_n18.b1 MSMg01no469_n18.b1 CHROMAT_FILE:
MSMg01no469_n18.b1 PHD_FILE: MSMg01no469_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:35 2005
         (500 letters)



>mm_chrX_46888115_46889014
          Length = 900

 Score =  949 bits (491), Expect = 0.0
 Identities = 497/499 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacaggcagcagcaggagaatgtgtgccttactaggtgtagcttgagcatatatgacctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 cacaggcagcagcaggagaatgtgtgccttactaggtgtagcttgagcatatatgacctc 703

                                                                       
Query: 61  aaagcctacctccacagttacacacttccttcaacaagaccacacctactcaaacaagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaagcctacctccacagttacacacttccttcaacaagaccacacctactcaaacaagga 643

                                                                       
Query: 121 aacacctcctaatagtgccacccccaatggccaaacattcaagcacatgagtgtatgggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aacacctcctaatagtgccacccccaatggccaaacattcaagcacatgagtgtatgggg 583

                                                                       
Query: 181 gccttacctattcaaaccaccacaaatatgtttttaacaaggtgaagaaagatcactagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gccttacctattcaaaccaccacaaatatgtttttaacaaggtgaagaaagatcactagt 523

                                                                       
Query: 241 attattataaacaaaactgactttgtaacagggaaaatatattagtgataaagataaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 attattataaacaaaactgactttgtaacagggaaaatatattagtgataaagataaatt 463

                                                                       
Query: 301 aatcagccagaaagtcagaaaggataaagattatctcaacaacagtatatttaacctcac 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aagcagccagaaagtcagaaaggataaagattatctcaacaacagtatatttaacctcac 403

                                                                       
Query: 361 atcagaattcacattcttctcaaatatacgtggaaaataagccatatttggggggcataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atcagaattcacattcttctcaaatatacgtggaaaataagccatatttggggggcataa 343

                                                                       
Query: 421 aacaaagatgtatttctatgaatgaacagataaattgtgttacatctagacagcagaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 342 aacaaagatgtatttctatgaatgaacagataaattgtgttacatctagacagcaaaata 283

                              
Query: 481 tgattcagtattaaaagaa 499
           |||||||||||||||||||
Sbjct: 282 tgattcagtattaaaagaa 264


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)