Query= MSMg01no471_e18.b1 MSMg01no471_e18.b1 CHROMAT_FILE:
MSMg01no471_e18.b1 PHD_FILE: MSMg01no471_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(621 letters)
>mm_chrX_81479723_81480745
Length = 1023
Score = 1077 bits (557), Expect = 0.0
Identities = 603/621 (97%), Gaps = 8/621 (1%)
Strand = Plus / Plus
Query: 5 gaattccacaaagttccttaagatctttggagaaagatactctctgcataattattctta 64
|||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacaaagtgctttaagctctttggagaaagatactctctgcataattattctta 264
Query: 65 actcccatatgctcttatgatataaactattctgctaggaaatcctttgtagggattatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actcccatatgctcttatgatataaactattctgctaggaaatcctttgtagggattatc 324
Query: 125 acttaaaatgaagtttttattattaaaagcagcaagaatatccatccactaacagatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttaaaatgaagtttttattattaaaagcagcaagaatatccatccactaacagatgaa 384
Query: 185 aatatgctttaggcaactgttttcaaataggcagaaatcttggactatggagtcatccgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 aatatgctttaggcaactgttttcaaataggcagaaatcttggactatggagtcatctgt 444
Query: 245 gcct--aaaaaaattaagaaataatgaaaattagtagtaagtctgggatattaattattt 302
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 gcctaaaaaaaaattaagaaataatgaaaattggtagtaagtctgggatattaattattt 504
Query: 303 cattaaatcaaaataaaaagacaagtcacatatcctttaaaatagttgcataaatctttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattaaatcaaaataaaaagacaagtcacatatcctttaaaatagttgcataaatctttt 564
Query: 363 tctaggaatatgtaactttgggcataacagtcttaaaaataaattattttatggctgtga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 tctaggaatatgtaactttgggcataacagtcttaaaaataaattattttatgtctgtga 624
Query: 423 aattaaagtgtgcttaatttactaattttacaacaataattcttttgtgattctcaaact 482
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aattaaattgtgcttaatttactaattttacaacaataattcttttgtgattctcaaact 684
Query: 483 tagctgtatattggcatgatattaaccaacaaggagggaaagaag----gaaggaaggaa 538
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 685 tagctgtatattggcatgatagaaaccaacaaggagggaaagaagacaggaaggaaggaa 744
Query: 539 ggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa 598
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 745 ggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagaaaggaaggaaggaaggaa 804
Query: 599 aggaaggaaggaaggaaggaa 619
||||| ||||||||||||||
Sbjct: 805 -ggaag-aaggaaggaaggaa 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 107
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1023
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1013
Effective search space: 618943
Effective search space used: 618943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_e18.g1 MSMg01no471_e18.g1 CHROMAT_FILE:
MSMg01no471_e18.g1 PHD_FILE: MSMg01no471_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(547 letters)
>mm_chrX_81661994_81662942
Length = 949
Score = 1042 bits (539), Expect = 0.0
Identities = 546/549 (99%), Gaps = 2/549 (0%)
Strand = Plus / Minus
Query: 1 agggggcagcggaaggttgatctatattgtctatttagtaagtttgaggacagctaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 agggggcagcggaaggttgatctatattgtctatttagtaagtttgaggacagctaatgc 690
Query: 61 tagagagagagattctttttttttgaataaatatgtttttattttctttagatgaaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tagagagagagattctttttttttgaataaatatgtttttattttctttagatgaaagat 630
Query: 121 gttggtgaattagggttacatagtgtagagagcaggcatcgaagatttgtattgccatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gttggtgaattagggttacatagtgtagagagcaggcatcgaagatttgtattgccatgt 570
Query: 181 gaggcattatgaatcttcaggaagtcatttccatctggctatactttaatttacacatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaggcattatgaatcttcaggaagtcatttccatctggctatactttaatttacacatct 510
Query: 241 tttcatctgtggctttgttaagattctccattctctgtttcatgacaagtggacaattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tttcatctgtggctttgttaagattctccattctctgtttcatgacaagtggacaattgg 450
Query: 301 ggatgggagagtttcaaggttccttaagaagctaataatggtaacaatgtccaggtgcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggatgggagagtttcaaggttccttaagaagctaataatggtaacaatgtccaggtgcat 390
Query: 361 tttttgt--gtgtgtgtgtgtgtgctgagttcaattcattgggatctaaaaccacctgaa 418
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tttttttttgtgtgtgtgtgtgtgctgagttcaattcattgggatctaaaaccacctgaa 330
Query: 419 gggttacaacaatcatttttccaaggaaatataggcttcagtgatgagagacaatagtga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gggttacaacaatcatttttccaaggaaatataggcttcagtgatgagagacaatagtga 270
Query: 479 ggtacaactttgggaatattagagatttaaggtattagaaactgggagaactttagtact 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtacaactttgggaatattagagatttaaggtattagaaactgggagaactttagtact 210
Query: 539 gaaagttgt 547
|||||||||
Sbjct: 209 gaaagttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 949
Length adjustment: 10
Effective length of query: 537
Effective length of database: 939
Effective search space: 504243
Effective search space used: 504243
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
