Query= MSMg01no474_a05.b1 MSMg01no474_a05.b1 CHROMAT_FILE:
MSMg01no474_a05.b1 PHD_FILE: MSMg01no474_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:18 2005
(528 letters)
>mm_chrX_17495279_17496206
Length = 928
Score = 808 bits (418), Expect = 0.0
Identities = 430/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 95 gttcattattgggataacgtcctaatagtctaatcctttcatcattacaaagccttcttt 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gttcattattgggataacgtcctaatagtctaatcctttcatcattacaaagccttcttt 869
Query: 155 atcctgtaatttttgctgtaacatctatgttttttttcctaatactgacattgcaactct 214
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 868 atcctgtaatttttgctgtaacatctatg-tttttttcctaatactgacattgcaactct 810
Query: 215 agcattcttagggttgcaatttatatcttgtatcattttctacttttttaaactttcatt 274
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 809 agcattcttagggttgcaatttatatcttgtatcattttctacttttttaaactttcagt 750
Query: 275 ttatctgcatattttttaaagatattcagtttaacagattttttattattcttccatcct 334
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 749 ttatctgcatattttttaaagatattcagtttaacagaatttttattattcttccatcct 690
Query: 335 cagggtgaatggaaatgaactcattgccacactcagaagttgcccaatcctggaggcaag 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cagggtgaatggaaatgaactcattgccacactcagaagttgcccaatcctggaggcaag 630
Query: 395 agagaaaggaaggatggaaagagacttattattcctcagggattagaggctggaagtgac 454
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 629 agagaaaggaaggatggaaagagatttattattcctcagggattagaggctggaagtgac 570
Query: 455 acccctttccgtttcttctgggatgtaggaatctcaaacctagagcttctttgcaacctt 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 acccctttccgtttcttctgggatgtaggaatctcaaacctagagcttctttgcaacctt 510
Query: 515 tcatctaggattga 528
||||||||||||||
Sbjct: 509 tcatctaggattga 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_a05.g1 MSMg01no474_a05.g1 CHROMAT_FILE:
MSMg01no474_a05.g1 PHD_FILE: MSMg01no474_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:19 2005
(509 letters)
>mm_chrX_17335058_17335966
Length = 909
Score = 953 bits (493), Expect = 0.0
Identities = 505/509 (99%)
Strand = Plus / Plus
Query: 1 tctggctcactcttttatgtccacatacatgctaagaaaaatagtaaggccaatgtcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggctcactcttttatgtccacatacatgctaagaaaaatagtaaggccaatgtcttg 260
Query: 61 gcagatggggcacacaaaaatattttttgtttgtttaactctaatattatctactgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagatggggcacacaaaaatattttttgtttgtttaactctaatattatctactgaaaa 320
Query: 121 aagaacaaaattaaaaataaatgctctgttctagtaactggttcacaaaaacgtaatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaacaaaattaaaaataaatgctctgttctagtaactggttcacaaaaacgtaatcaa 380
Query: 181 tatactaagtgaacagaaaattataagacaagtctgcactaaaaggagtctgttgttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatactaagtgaacagaaaattataagacaagtctgcactaaaaggagtctgttgttgtg 440
Query: 241 tctacttatttttatgaatacacaggcaattctagcatcatgataatttctcttttaaat 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctacttacaattatgaatacacaggcaattctagcatcatgataatttctcttttaaat 500
Query: 301 atgcttacatgagcaacaggtatcaatagacagtctcattttttttcaggaatgaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcttacatgagcaacaggtatcaatagacagtctcattttttttcaggaatgaaggaa 560
Query: 361 gaaaggaaggaaagaagaaaaaagacagagacagagataaataggctacttgtatcttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaggaaggaaagaagaaaaaagacagagacagagataaataggctacttgtatcttct 620
Query: 421 aggaagccaagtgtccatgcatttctattgataaggtgtgggtgacctgtctgatacact 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaagccaagtgtccatgcatttctattgataaggtgtgggtgacctgtctgatacact 680
Query: 481 gaaaatccacccccttggttccttttcac 509
|||||||||||||||||||||||||||||
Sbjct: 681 gaaaatccacccccttggttccttttcac 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
