NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTTTCTCTGAGCCCCATTTTTAATGGGGTTATTTGAT
TTTCTGGGGTCCACCTCCTTGAGTTCTTTATATATATTGGATATTAGTAC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTC
TTTTTGTCTTATTGATCTTGATCTTTGACAAGGGAGCAAAAACCATCCAG
TGTAAAAAAGACTGCATTTTCAACATATGGTGCTGACACAACTGGCGGTT
ATCATGTAGAAGAATGCGTTTTGATCCATTCCTATCTCCTTGTACTAAGG
TCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAAA
CTTATAGAGGAGAAAGTAGGGAAAAGCCTCGAAGATATGGGTACAGGGGA
AAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCG
ATAAATGGGACCTCATAAAGTTGCAAAGCTTCTGCAAGGCAAAAGACACC
TGTATTTCTTTAAGTGAGTTATTAATGCCCTTCTTAAAATCCTCTACCAG
CATCATGAGATATGATTTTAAATTTGAATGTTGCTTTTCTGGTGTGTTGG
TGTATCCAGGACTCACTGTGGTGCATGTACTGGGTTCTGATGATGCCAAG
TGGTCCTGTTTTCTGTTA

NCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGAATGGAGGGGTTGGACCCTTTA
AAACTGGTAAACACTCTACATGCTGAAGATGTGGTAATAGGAAAGTTTGC
AGGATTTTGTATGAGACAGGCTCACAGAAGTTAATGCCAGAAGGGCATTT
CAAGACTGTTACTATGGTAACCTATTTATCTCTTGCCATTAGATGTAAAC
AAGTCTGACATGCTGCACTTTATGATATAAATTTGAATACAATCTTGTAA
TAACATCCATTAATTTTTCTGCAATCACATCTTAATTAATAAGAGGAATT
ATACTTGAATTTTCTTAATGTCTAACACAAATGATCATGCAGTCAGGACA
GACAAGTTATTCTGAGGATGAAGAGATAAAATGTGAATGCCACTTCTAAA
TTTGTGAAATGGTCAATTAGTTTCTCCCTAAAGGAACACTTTTTTGGAAG
GGAGAAGGTAATGTACATAAAGAGAGTATATTATTCTCACATACATTGTT
ACAAAATCATAGTTGTTTCCTTCCACCCCACAAACACTTTACACAGCTTT
ATACAGTCAGTGCCACAAAATATACCAAGCAAACAACTGACACATTAGTT
AAGAGGCCTTCCATTTTACTTTGACAGTTCATGATAATGGAATTTAATTG
TGGAAAAAGAGAN

Query= MSMg01no474_a18.g1 MSMg01no474_a18.g1 CHROMAT_FILE:
MSMg01no474_a18.g1 PHD_FILE: MSMg01no474_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:21 2005
         (565 letters)



>mm_chrX_106822675_106823639
          Length = 965

 Score = 1062 bits (549), Expect = 0.0
 Identities = 561/565 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagaatggaggggttggaccctttaaaactggtaaacactctacatgctgaagatgtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aagaatggaggggttggaccctttaaaactggtaaacactctacatgctgaagatgtggt 706

                                                                       
Query: 61  aataggaaagtttgcaggattttgtatgagacaggctcacagaagttaatgccagaaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 705 aataggaaagtttgcaggattttgtatgagacaggctcacagaaggtaatgccagaaggg 646

                                                                       
Query: 121 catttcaagactgttactatggtaacctatttatctcttgccattagatgtaaacaagtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 catttcaagactgttactatggtaacctatttatctcttgccattagatgtaaacaagtc 586

                                                                       
Query: 181 tgacatgctgcactttatgatataaatttgaatacaatcttgtaataacatccattaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgacatgctgcactttatgatataaatttgaatacaatcttgtaataacatccattaatt 526

                                                                       
Query: 241 tttctgcaatcacatcttaattaataagaggaattatacttgaattttcttaatgtctaa 300
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aagctgcaatcacatcttaattaataagaggaattatacttgaattttcttaatgtctaa 466

                                                                       
Query: 301 cacaaatgatcatgcagtcaggacagacaagttattctgaggatgaagagataaaatgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cacaaatgatcatgcagtcaggacagacaagttattctgaggatgaagagataaaatgtg 406

                                                                       
Query: 361 aatgccacttctaaatttgtgaaatggtcaattagtttctccctaaaggaacactttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aatgccacttctaaatttgtgaaatggtcaattagtttctccctaaaggaacactttttt 346

                                                                       
Query: 421 ggaagggagaaggtaatgtacataaagagagtatattattctcacatacattgttacaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggaagggagaaggtaatgtacataaagagagtatattattctcacatacattgttacaaa 286

                                                                       
Query: 481 atcatagttgtttccttccaccccacaaacactttacacagctttatacagtcagtgcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atcatagttgtttccttccaccccacaaacactttacacagctttatacagtcagtgcca 226

                                    
Query: 541 caaaatataccaagcaaacaactga 565
           |||||||||||||||||||||||||
Sbjct: 225 caaaatataccaagcaaacaactga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)