Query= MSMg01no474_l23.b1 MSMg01no474_l23.b1 CHROMAT_FILE:
MSMg01no474_l23.b1 PHD_FILE: MSMg01no474_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:18 2005
(524 letters)
>mm_chrX_165560940_165561863
Length = 924
Score = 1000 bits (517), Expect = 0.0
Identities = 522/524 (99%)
Strand = Plus / Minus
Query: 1 tagctgaacaatgtttctttctcaaaatgcatcacgatcaacttcattagaacaaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tagctgaacaatgtttctttctcaaaatgcatcacgatcaacttcattagaacaaagtta 665
Query: 61 tatgggctgataaattgctgtcttttgccaaagtattactcatcactgtatattcgccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tatgggctgataaattgctgtcttttgccaaagtattactcatcactgtatattcgccca 605
Query: 121 gcatatgccactgagaaaccccatccgatcaggggaaagaaggatgtggggatattatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gcatatgccactgagaaaccccatccgatcaggggaaagaaggatgtggggatattatta 545
Query: 181 gattctttaaacacaagttgcattgtctctggcaagcacatgatatacacattgcatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gattctttaaacacaagttgcattgtctctggcaagcacatgatatacacattgcatctt 485
Query: 241 atgatttccccccacccacccccacagctgactttcatccattagaacatgttgatggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atgatttccccccacccacccccacagctgactttcatccattagaacatgttgatggat 425
Query: 301 ataccatttcaaaatgaaatatttggatgtctgactctgatttagggaaagggaaatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ataccatttcaaaatgaaatatttggatgtctgactctgatttagggaaagggaaatggt 365
Query: 361 gagctaatttcctcttttatcaagctgaatcactcagttcactctgttgccatgcacgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagctaatttcctcttttatcaagctgaatcactcagttcactctgttgccatgcacgca 305
Query: 421 caagtaatgtcatagcaacctctgggcttgctcttaaacacacaacagtagaaccatatt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 caagtaatgtcatagcaacctctgggcttgctcttaaacacacaacagtagaaccacatt 245
Query: 481 cacaggcacttttttttttaaatctaagatttanattctttgag 524
||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 244 cacaggcacttttttttttaaatctaagatttaaattctttgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_l23.g1 MSMg01no474_l23.g1 CHROMAT_FILE:
MSMg01no474_l23.g1 PHD_FILE: MSMg01no474_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:18 2005
(532 letters)
>mm_chrX_165410946_165411876
Length = 931
Score = 1000 bits (517), Expect = 0.0
Identities = 526/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Plus
Query: 1 ttctctaaagtgaggattggcaaactctgacccatgggtcacatctgatccacatgcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctctaaagtgaggattggcaaactctgacccatgggtcacatctgatccacatgcctg 260
Query: 61 ctatttcaaatcaagtttctttagcaaacagtcatggatatttaagtggtctctatagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatttcaaatcaagtttctttagcaaacagtcatggatatttaagtggtctctatagct 320
Query: 121 tatcttggaagacagtgacagaatttggtggctcctatagaaacagtctaatgtacaaca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tatcttggaagacagtgacagaatttggtggctcctatagaaactgtctaatgtacaaca 380
Query: 181 ctgaacatacttagcatctgattctttccacatgtcaacctgtgctttctaacaaagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaacatacttagcatctgattctttccacatgtcaacctgtgctttctaacaaagagg 440
Query: 241 atcaagctcattttttgttcatataaaatgctaggagcctttatccctaccttcattttt 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaagctcattttt-gttcatataaaatgctaggagcctttatccctaccttcattttt 499
Query: 301 ttctttgattgctcttgttagcatgtatctgagatgacagaaccactctctcactgggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 ttctttgattgctcttgttagcatgtatctgagatgacagaaccactctctaactgggat 559
Query: 361 ccaacagctaggcattttttcttttttctgctttaaagtcctttggtattttgctgctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccaacagctaggcattttttcttttttctgctttaaagtcctttggtattttgctgctgt 619
Query: 421 ctgaatgtcagaggctcttctccgtaggctttcttcctgctcttcaatagaagccaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgaatgtcagaggctcttctccgtaggctttcttcctgctcttcaatagaagccaaatc 679
Query: 481 tttgctgtacaggctgaaagtaaacacttagcttaaagactttccccgg 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttgctgtacaggctgaaagtaaacacttagcttaaagactttccccgg 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 931
Length adjustment: 10
Effective length of query: 522
Effective length of database: 921
Effective search space: 480762
Effective search space used: 480762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
