Query= MSMg01no476_m19.b1 MSMg01no476_m19.b1 CHROMAT_FILE:
MSMg01no476_m19.b1 PHD_FILE: MSMg01no476_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:01 2005
(196 letters)
>mm_chrX_45701657_45702255
Length = 599
Score = 323 bits (167), Expect = 4e-93
Identities = 190/199 (95%), Gaps = 3/199 (1%)
Strand = Plus / Plus
Query: 1 ggattgggttgaatatatagagctttcccagggtcagctagcctcttacgaagccatgca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ggattgggttgaatatatagagctttcccagggtcagctagcctcttaagaagccatgca 260
Query: 61 agaattctgtgctgagtttggatgggaacatgaacactagaggggaatggagagactaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaattctgtgctgagtttggatgggaacatgaacactagaggggaatggagagactaga 320
Query: 121 gagtgaaacttgctactaattggacaggaagggctagaaaacacgga---tggctgtgtg 177
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 321 gagtgaaacttgctactaattggacaggaagggggagaaaacacggaggatggctgtgtg 380
Query: 178 atttaagagggggcactta 196
| |||||||||||||||
Sbjct: 381 aaggaagagggggcactta 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 599
Length adjustment: 8
Effective length of query: 188
Effective length of database: 591
Effective search space: 111108
Effective search space used: 111108
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_m19.g1 MSMg01no476_m19.g1 CHROMAT_FILE:
MSMg01no476_m19.g1 PHD_FILE: MSMg01no476_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:01 2005
(243 letters)
>mm_chrX_45884764_45885406
Length = 643
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 aaatccctgagccccactttagagcttctagatagactgggttggaattctgtactgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaatccctgagccccactttagagcttctagatagactgggttggaattctgtactgtaa 384
Query: 61 ctaattgaggttagcttgaaccagcatttgagaaccactaattcaagagactcgccaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctaattgaggttagcttgaaccagcatttgagaaccactaattcaagagactcgccaatg 324
Query: 121 agctatttcatcgatcctaacagccctgcactgcccttagggacataggtagctaaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agctatttcatcgatcctaacagccctgcactgcccttagggacataggtagctaaagga 264
Query: 181 cttggattaacccaggggggttcgttgtgtgaatcattctgagttccttgagaaactggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttggattaacccaggggggttcgttgtgtgaatcattctgagttccttgagaaactggc 204
Query: 241 ctt 243
|||
Sbjct: 203 ctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
