XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGCGGAATTCAA
AATGACGTAACCTATTCAGTAACTAATTAGCATTATAAAGGAAGGAGCCA
ACAGTTCAGGGCTAGTCTGCAAGATGTTTACTAGGACAGAAAGGATAGAC
TTATCCAAATAGGGTTTACCATGAGAAAAGTTAGGAAATCCCACTGAGAC
AGGTTTCTTCACTAGGCCCTAAGAATTCAGGCAGAACTATAGAGCATAAA
TAAATGTTATGCCTCAGCCCAGCCTTTTCTTTTTTATATTAACAACGGGG
AGGAGATGTTTTCCCCCCCCCCAGCCTGAAATCTGGCTGATCAGGTTTGA
TTGCTGAGAGAGCACCAGGGGTGGAGCCTGCCACCCTATCGATCTGCCAT
TCCCACTGCTGCTACCTGCCGCTTAGCTGTTCCAGAGCCAAACAGGTGGT
CACCTGCAACTGGACTCCAAGGATGATTTGGCGGGAATGGGCCCCTTCCC
CCTTCTTCATAACCTGGTGCTCTGAATAGTAAAATTGAGCTTTGATGAGA
GCCTTTGTTGTCTTAGCTCTATTCTTTCTCTTGTCTGTCTAGTTCCCTTT
CTTTCAGCTTGAGTCTACTGCTTCAGCCATACCCTGTTCCTCGCGAGCCG
CTGGATGGCACACAACAAATAATTATCATGATATCATTATGGCATGCTTA
TAAGTATCATCACCTAATTCTGTTCN

GTGAGTAGGCCTGGNGGNCGCCATTTCAAAAAAGGGAGGTGAACTATAGA
TTGCCCCGCGGAATTCTCTTCTAGAAGAGCAGGAGGGAACTCTTCCATGG
GGAGTGGTAGTAAAAGATATACAAGCCATACCCAGTCCAGCTCTAAGAAC
AGACCTGACAACCTGACAGTGCTCTCCAGGAAACAAAGAAACAACAGACT
GACAGCTACACAGAAAAGCTGGAATAAGGTGAACTGGGATCCCTTGTGGA
GAAGTCACAGCACTCTGGAAAGCATGGAGTGTTTATTATATATACAGCTG
AACAGTATTGCATGGTTACAACATACAGGTAAGAAAGGATGCAGGATTTA
GGGCATACAGCTGAAGCAAGGAAACAGGTTTAGTTAATCTCAGTAGGAGC
AGTCTCTGTAGGAGGGCAGGCTTCAGGACATGAGTACCCTGGCAGAGAAA
GTTATTGTGGACATTCTCGCACACATTGTCAATCATTTCACTCCTCCCTC
CCCAGGAAGACTTTGCCATTCCTCTGAGCCTGAGGCTATGGTGACTATAT
CCTTCGTACACAGTCACACTTAGGACATCACTCAGGCAAGGTTTTCTCCT
CTCCCCAGGTGTGCCCTTTTTGACATGGCAATTCTCTAGAACAAGCCTTT
CTTTATGGGGTTGATGAAGAGGGAGGTATCTCACAGAGAGTGAATCAGAA
TTATCTATTGAGTTCACCTATGTTGTAGC

Query= MSMg01no478_l14.g1 MSMg01no478_l14.g1 CHROMAT_FILE:
MSMg01no478_l14.g1 PHD_FILE: MSMg01no478_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:30 2005
         (662 letters)



>mm_chrX_161316919_161317980
          Length = 1062

 Score = 1226 bits (634), Expect = 0.0
 Identities = 655/662 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcttctagaagagcaggagggaactcttccatggggagtggtagtaaaagatatacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tctcttctagaagagcaggagggaactcttccatggggagtggtagtaaaagatatacaa 803

                                                                       
Query: 61  gccatacccagtccagctctaagaacagacctgacaacctgacagtgctctccaggaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gccatacccagtccagctctaagaacagacctgacaacctgacagtgctctccaggaaac 743

                                                                       
Query: 121 aaagaaacaacagactgacagctacacagaaaagctggaataaggtgaactgggatccct 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 742 aaagaaacaacagactgacagctacacagaaaagctggaataaggtgaactgggatcctt 683

                                                                       
Query: 181 tgtggagaagtcacagcactctggaaagcatggagtgtttattatatatacagctgaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgtggagaagtcacagcactctggaaagcatggagtgtttattatatatacagctgaaca 623

                                                                       
Query: 241 gtattgcatggttacaacatacaggtaagaaaggatgcaggatttagggcatacagctga 300
           | |  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 622 ggaaggcatggttacaacatacaggtaagaaaggatgcgggatttagggcatacagctga 563

                                                                       
Query: 301 agcaaggaaacaggtttagttaatctcagtaggagcagtctctgtaggagggcaggcttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agcaaggaaacaggtttagttaatctcagtaggagcagtctctgtaggagggcaggcttc 503

                                                                       
Query: 361 aggacatgagtaccctggcagagaaagttattgtggacattctcgcacacattgtcaatc 420
           |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 502 aggacatgagtatcctggcagagaaagttattgtggacattctcgcacacactgtcaatc 443

                                                                       
Query: 421 atttcactcctccctccccaggaagactttgccattcctctgagcctgaggctatggtga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atttcactcctccctccccaggaagactttgccattcctctgagcctgaggctatggtga 383

                                                                       
Query: 481 ctatatccttcgtacacagtcacacttaggacatcactcaggcaaggttttctcctctcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctatatccttcgtacacagtcacacttaggacatcactcaggcaaggttttctcctctcc 323

                                                                       
Query: 541 ccaggtgtgccctttttgacatggcaattctctagaacaagcctttctttatggggttga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ccaggtgtgccctttttgacatggcaattctctagaacaagcctttctttatggggttga 263

                                                                       
Query: 601 tgaagagggaggtatctcacagagagtgaatcagaattatctattgagttcacctatgtt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgaagagggaggtatctcacagagagtgaatcagaattatctattgagttcacctatgtt 203

             
Query: 661 gt 662
           ||
Sbjct: 202 gt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)