Query= MSMg01no479_a21.b1 MSMg01no479_a21.b1 CHROMAT_FILE:
MSMg01no479_a21.b1 PHD_FILE: MSMg01no479_a21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:54 2005
(652 letters)
>mm_chrX_148843443_148844494
Length = 1052
Score = 648 bits (335), Expect = 0.0
Identities = 347/351 (98%)
Strand = Plus / Minus
Query: 4 gaattcatagagctatccgtggaagatgaaaagctaattttcttgaatggagccaacatt 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gaattcatagagctaactgtggaagatgaaaagctaattttcttgaatggagccaacatt 292
Query: 64 ttacactctatcttgaaaagaacatttgtttttgtattttatactataaaataagtacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttacactctatcttgaaaagaacatttgtttttgtattttatactataaaataagtacca 232
Query: 124 aaataatgacaaataaaataaagccatgggcttgggctccttctgatctgcactggttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 231 aaataatgacaaataaaataaagccatgggcttgggctccttctgatctgcaccggttta 172
Query: 184 ccttgggtgagaactctgctcccagccccacagccaccagaggcagctccactcccaggc 243
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 171 ccttgggtgagaactctgctcccagccccacagccaccagaggcggctccactcccaggc 112
Query: 244 actccagcattcccaggatctcaggatcaggggtgagtagaacacaacacctgttgcaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 actccagcattcccaggatctcaggatcaggggtgagtagaacacaacacctgttgcaac 52
Query: 304 accaccagtaactgagactagcaggatccagggacacaggaactctgccca 354
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 accaccagtaactgagactagcaggatccagggacacaggaactctgccca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_a21.g1 MSMg01no479_a21.g1 CHROMAT_FILE:
MSMg01no479_a21.g1 PHD_FILE: MSMg01no479_a21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:54 2005
(540 letters)
>mm_chrX_148713171_148714112
Length = 942
Score = 994 bits (514), Expect = 0.0
Identities = 535/544 (98%), Gaps = 6/544 (1%)
Strand = Plus / Plus
Query: 1 aatcccagggatccacgcagtaagagagaatcaactcatgcaagttgtcctggtcaccat 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcccagggatccacgcggtaagagagaatcaactcatgcaagttgtcctggtcaccat 260
Query: 61 ttgtgtgcgtgcacacataaaatagatgtaataaaaataatttttaaaatgttgtatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgtgcgtgcacacataaaatagatgtaataaaaataatttttaaaatgttgtatctc 320
Query: 121 tttattatttcctgttgaatcccagaggagaaatgagtcttcctcccctaccagggccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttattatttcctgttgaatcccagaggagaaatgagtcttcctcccctaccagggccct 380
Query: 181 tctcttctttatgtcatgtatattgtgtatatttacatgatgtatccagaaactggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcttctttatgtcatgtatattgtgtatatttacatgatgtatccagaaactggaaaa 440
Query: 241 atctcctggaccaataaaatgactcaggacaaaaacttcatgtatactctaattccactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctcctggaccaataaaatgactcaggacaaaaacttcatgtatactctaattccactc 500
Query: 301 taactggtggaccgtaaagatagtctgggccagcagagattaacagttaatcaaaatcaa 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 taactggtggaccgtaaagatagtctgggtcagcagagattaacagttaatcaaaatcaa 560
Query: 361 tacttgtgtatttcaagagatgtgggtatttttttttttt--atgtcaccaaaacagagg 418
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 tacttgtgtatttcaagagatgtgggtattttttttttttttatgtcaccaaaacagagg 620
Query: 419 caaaggaagggaaggaaattttgactacacttttttttttttttaattttgatttttcga 478
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 621 caaaggaagggaaggaaattttgactacacttttttttttttt--attttggtttttcga 678
Query: 479 gac--ggtttctctgtatagccctggctgtcctggagctcactctgtagaccaggctggc 536
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gacagggtttctctgtatagccctggctgtcctggagctcactctgtagaccaggctggc 738
Query: 537 ctcg 540
||||
Sbjct: 739 ctcg 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 942
Length adjustment: 10
Effective length of query: 530
Effective length of database: 932
Effective search space: 493960
Effective search space used: 493960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
