AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCAAGAATTGCCAACTAAAGATGGAATAAATAATGATGTCAATGGAGAA
TATCAACATCAAGTTCAATACAGAGATAGAAATATTGAGCTAAAATTCTC
AAATGTAAATATTGGTAATTAAAAACTAGATTAATCAAATAAAAAGCTTC
TTAAAATGCTTCAACAAAGAAATGGATCAAGGGAAATATGTAATATCATG
GCATAAAATCAGGGTTAATGAATTAAGAGTATCATAAAATGACAATGATA
ATTTAATATAGTCTGAACAGAGCATGTAAGATATATACAAATTTATCAAA
AGATCAAATCTATGAATCATGGACATAGGAGAAAAAATGCATACAGAAGA
CAAATAAAACATTTTTTGTTTGTTTATTTGTTTTCAAGACAGGTTTTTCT
CTGTGTATCCCTGGCTGTCCTGGAATTCACTCTGTAGACCAGGCTGGCCT
CAAACTCAGAAATCTGCCTGCCCCTGCCTCCCAAGTGCTGGAATTAAAGG
CGTGCACCACTACTGTCTGGCCAAATAAAACATTTTAAATGAAATCAGAG
AAGAAAAAATTTTCCAAACTTAGTGAAAAAGATGGTCATCCATATTAATG
TGGCATTTAATGTACCACATATACTATACCAGAGAAGAAAACCTCTACAT
CATAACATACTCAAATATTAAAAGAAATAAAACAATGTATTGCTTAATAT
AAGAAGACACCAAGCCACATATAAAGGCAGGGTCAN

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTCTGACAAATGCAGATTCTCCAGATA
CTTAAAAGTTACACTCATATAAGAATTTAGAAAGGCCTAGGAAATAGGGG
GCATTCTGCTAAGAGCAGAACCCCCCTGGTGATAGCCTTCACAAGGATCA
AAGGAGTAGCATTAGGGTGTGAAATCCTTACCTGTCATCAAGGCAGGACT
GCTTTATCTTTACTGTAAACATTTACCTGGTTCCTGTAAGTCCCTTTGTA
GTCATTCCTTTGTTTTGTATCATGTAACTTCAATGTACTTTGCCTGCTGT
GACTTGCTACCCCTTTTATTTTCTGTACTATATAAGACTGGTGTTCACTT
TGTGACAATACATTCGTATTCTACACAATCTCGCATGTTGGTCTGTTTGT
CATTCCTGCAAACTCCTTGCCCATCTGCACCCAGAGACCCGTTCCACACA
GACAAGGGACCCAGAGGGTCTGCGGCACCAGGTGCTCTGGCAAAGCCCTC
CCGGGCGGGGTGGACACCTCTCCTCTGGCAGGGAAGGTGCCCGGATGTCT
GGAGCCCGAAACGGGGTCTGGCTCAGAAGCTTTGTGGCTTCTGCCTGTCC
CAGAAGCCAGATGGTTACCCGGGGTGCCCTGGAAAAGCCCTCCCGGGTAG
GGCGGACACCTCTCCTCTGGCANGGTATGTGCCTGGATGTCTGGAGCCCG
AATTGGTTTTGCCTCAAAACTGGGTGGAN

Query= MSMg01no479_j21.b1 MSMg01no479_j21.b1 CHROMAT_FILE:
MSMg01no479_j21.b1 PHD_FILE: MSMg01no479_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:41 2005
         (639 letters)



>mm_chrX_94302677_94303715
          Length = 1039

 Score = 1083 bits (560), Expect = 0.0
 Identities = 575/580 (99%)
 Strand = Plus / Minus

                                                                       
Query: 22  aactaaagatggaataaataatgatgtcaatggagaatatcaacatcaagttcaatacag 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aactaaagatggaataaataatgatgtcaatggagaatatcaacatcaagttcaatacag 521

                                                                       
Query: 82  agatagaaatattgagctaaaattctcaaatgtaaatattggtaattaaaaactagatta 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agatagaaatattgagctaaaattctcaaatgtaaatattggtaattaaaaactagatta 461

                                                                       
Query: 142 atcaaataaaaagcttcttaaaatgcttcaacaaagaaatggatcaagggaaatatgtaa 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atcaaataaaaagcttcttaaaatgcttcaacaaagaaatggatcaagggaaatatgtaa 401

                                                                       
Query: 202 tatcatggcataaaatcagggttaatgaattaagagtatcataaaatgacaatgataatt 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tatcatggcataaaatcagggttaatgaattaagagtatcataaaatgacaatgataatt 341

                                                                       
Query: 262 taatatagtctgaacagagcatgtaagatatatacaaatttatcaaaagatcaaatctat 321
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 340 taatatagtctgaacagagcatgtgagatatatacaaatttatcaaaagatcaaatctat 281

                                                                       
Query: 322 gaatcatggacataggagaaaaaatgcatacagaagacaaataaaacattttttgtttgt 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gaatcatggacataggagaaaaaatgcatacagaagacaaataaaacattttttgtttgt 221

                                                                       
Query: 382 ttatttgttttcaagacaggtttttctctgtgtatccctggctgtcctggaattcactct 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ttatttgttttcaagacaggtttttctctgtgtatccctggctgtcctggaattcactct 161

                                                                       
Query: 442 gtagaccaggctggcctcaaactcagaaatctgcctgcccctgcctcccaagtgctggaa 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 160 gtagaccaggctggcctcaaactcagaaatctgcctgcccctgcctcccaactgctggaa 101

                                                                       
Query: 502 ttaaaggcgtgcaccactactgtctggccaaataaaacattttaaatgaaatcagagaag 561
            |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 100 ataaaggtgtgcaccactactgcctggccaaataaaacattttaaatgaaatcagagaag 41

                                                   
Query: 562 aaaaaattttccaaacttagtgaaaaagatggtcatccat 601
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  aaaaaattttccaaacttagtgaaaaagatggtcatccat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)