Query= MSMg01no479_k19.b1 MSMg01no479_k19.b1 CHROMAT_FILE:
MSMg01no479_k19.b1 PHD_FILE: MSMg01no479_k19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:45 2005
(645 letters)
>mm_chrX_153523075_153524119
Length = 1045
Score = 1224 bits (633), Expect = 0.0
Identities = 639/641 (99%)
Strand = Plus / Plus
Query: 5 gaattctctgctataccataaagtcctttatgaatccattcttgttgagctcaacatatg 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgctagactataaagtcctttatgaatccattcttgttgagctcaacatatg 264
Query: 65 tgtcaggcaccgttctaggcactaaagtagaacatgtaaccatactactgtgcccttata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtcaggcaccgttctaggcactaaagtagaacatgtaaccatactactgtgcccttata 324
Query: 125 gggtttttgttatggtaaaggatatcatacagaaagatacagacaaatgtgatgcaagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggtttttgttatggtaaaggatatcatacagaaagatacagacaaatgtgatgcaagaa 384
Query: 185 aagtggtcatgaaagccagggagaattattaacagaaaataaataaataagagggtgaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtggtcatgaaagccagggagaattattaacagaaaataaataaataagagggtgaga 444
Query: 245 atgatctgggaagttattactaatagtgacatttgagcacagagcacatgaaagtggaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgatctgggaagttattactaatagtgacatttgagcacagagcacatgaaagtggaag 504
Query: 305 gctgcatagtgaaaggagaatctttgacagcataatcgctggagagtgttaggaagaatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctgcatagtgaaaggagaatctttgacagcataatcgctggagagtgttaggaagaatg 564
Query: 365 tggggggcagtgagactacaggatgtgaaaaggtaatcaaagaggaaagagggaaactgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggggggcagtgagactacaggatgtgaaaaggtaatcaaagaggaaagagggaaactgt 624
Query: 425 attaggtaagccctaaggcaaattgccttcacctgtcaagctttgcaaagaacaaattcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attaggtaagccctaaggcaaattgccttcacctgtcaagctttgcaaagaacaaattcc 684
Query: 485 aggctacaacactaagaagtttaatctgcatctaagaatgagacagatacagaaagaatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggctacaacactaagaagtttaatctgcatctaagaatgagacagatacagaaagaatg 744
Query: 545 tcttaaagattcctcagatgatagataggaagaaaaacatcagaactactgacctagggt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcttaaagattcctcagatgatagataggaagaaaaacatcagaactactgacctagggt 804
Query: 605 tttcaaggtcatttgagaatactcacattttgtgagatgag 645
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttcaaggtcatttgagaatactcacattttgtgagatgag 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_k19.g1 MSMg01no479_k19.g1 CHROMAT_FILE:
MSMg01no479_k19.g1 PHD_FILE: MSMg01no479_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:45 2005
(697 letters)
>mm_chrX_153611006_153612102
Length = 1097
Score = 1239 bits (641), Expect = 0.0
Identities = 683/706 (96%), Gaps = 17/706 (2%)
Strand = Plus / Minus
Query: 1 aggttccatttccagcacccacatgaaagttcataaccatctgaaactcaaataccagtg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aggttccatttccagcacccgcatgaaagttcataaccatctgaaactcaaataccagtg 691
Query: 61 gatctgagttcctcttgcagtctccaaatcctccaatgcacatggtatacatacatacat 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 690 gatctgagttcctcttgcagtctccaaatcctccaatgcacatggt--------atacat 639
Query: 121 acatacatacatacatacatacatacatacagtcaaacattcatgtatatgaaataaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 acatacatacatacatacatacatacatacagtcaaacattcatgtatatgaaataaaat 579
Query: 181 aattacatatatatagaattataattgcttttggaaggcagaagtccatggatgccatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aattacatatatatagaattataattgcttttggaaggcagaagtccatggatgccatta 519
Query: 241 gtatgttttgttcctgtttaataatgggaatattgaattgttctaccatccattttatca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gtatgtcaggttcctgtttaataatgggaatattgaattgttctaccatccattttatca 459
Query: 301 gggaggtctaggcaaaagaaaaaatttaaaatggattttattacctcagaaga-----t- 354
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 458 gggaggtctaggcaaaagaaaaaatttaaaatggattttattacctcagaagagggtgtg 399
Query: 355 at---atatactattctgtttttaagcttcaagaactctggtttattctggtctgttttc 411
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atctaatatactattctgtttttaagcttcaagaactctggtttattctggtctgttttc 339
Query: 412 tgtttaagagtattctgtgtgctatttcttgttcctcacattctgtaaactaacaaacat 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgtttaagagtattctgtgtgctatttcttgttcctcacattctgtaaactaacaaacat 279
Query: 472 aaacaattgtcccctttctgaacatgaagtaagatatgtggttatctttagcaattataa 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaacaattgtcccctttctgaacatgaagtaagatatgtggttatctttagcaattataa 219
Query: 532 ttcatatctggagtcagagatagtgaagtttggttttcatcttgtaacaccctttgaaac 591
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ttcatatctggagtcagagacagtgaagtttggttttcatcttgtaacaccctttgaaac 159
Query: 592 aattgcatatgtatatgtatatgcatatgtatatgtatatttatatgtaagaagagatta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aattgcatatgtatatgtatatgcatatgtatatgtatatttatatgtaagaagagatta 99
Query: 652 acaactgtaattttcagaatgcataanatattaagtaaaaacaaaa 697
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 98 acaactgtaattttcagaatgcataaaatattaagtaaaaacaaaa 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
