Query= MSMg01no480_c14.b1 MSMg01no480_c14.b1 CHROMAT_FILE:
MSMg01no480_c14.b1 PHD_FILE: MSMg01no480_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:23 2005
(668 letters)
>mm_chrX_118328721_118329788
Length = 1068
Score = 1201 bits (621), Expect = 0.0
Identities = 653/664 (98%), Gaps = 2/664 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttgctgtcgtgttacctcactcaggatgatatcctccagatacatccatttt 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcttttgcggttgtgttacctcactcaggatgatatcctccagatacatccatttt 266
Query: 65 cctaagaatttcataaatgcattgtctttaatagctgagtagtactcaatggtgtaaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cctaagaatttcataaatgcattgtctttaatagctgagtagtactcaatggtgtaaatg 326
Query: 125 taccacattttccgtattcattcctctgttgagagacatctgggttctttccagcttctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 taccacattttccgtattcattcctctgttgagagacatctgggttctttccagcttctg 386
Query: 185 gctattgtaaatagggctgctatgaacatagtggagcatgtgtccttattaccagttgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gctattgtaaatagggctgctatgaacatagtggagcatgtgtccttattaccagttgga 446
Query: 245 ccatcttctgggtacatgcccaggagaggtattgctggttgatctgatattcttaaattt 304
||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 447 ccatcttcttggtacatgcccaggagtggtattgctggttgatctgatattcttaaatct 506
Query: 305 atgtttgcactctgctattatatgatacccctttacttattctttctttttcataaaaaa 364
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 507 atgtttgcactctgctattatatgatacccctttacttat-ctttctttttcataaaaaa 565
Query: 365 aatattacatttgtgtgtatgagtgtgtgtgtgcacgcatactatgacaagaggtcagag 424
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 566 a-tattacatttgtgtgtatgagtgtgtgtgtgcacgcatactatgataagaggtcagag 624
Query: 425 gataactaacattggggaatcaggtttcttattttattttatgagttctagttattgaac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gataactaacattggggaatcaggtttcttattttattttatgagttctagttattgaac 684
Query: 485 acagataatcagacttagcaaagatcctattttcccactgttgatatttttcttctaatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acagataatcagacttagcaaagatcctattttcccactgttgatatttttcttctaatt 744
Query: 545 atagaacacgtgtctatttttcaaattatttaaagagcagaaaaaatggctgtggtgact 604
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 745 atagaacacgtgtctatttttcaaactatttaaaaagcagaaaaaatggctgtggtgact 804
Query: 605 actattggatgtcaccttgatttcatctgaaagtagctaanacccaagaagctgaccatg 664
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 805 actattggatgtcaccttgatttcatctgaaagtagctaaaacccaagaagctgaccatg 864
Query: 665 catt 668
||||
Sbjct: 865 catt 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_c14.g1 MSMg01no480_c14.g1 CHROMAT_FILE:
MSMg01no480_c14.g1 PHD_FILE: MSMg01no480_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:23 2005
(302 letters)
>mm_chrX_118534864_118535565
Length = 702
Score = 557 bits (288), Expect = e-163
Identities = 300/306 (98%), Gaps = 4/306 (1%)
Strand = Plus / Minus
Query: 1 attgctctgtagtaaagctttaggtcaggcatggtgattccacttgaggttctgtaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 attgctctgtagtaaagctttaggtcaggcatggtgattccacttgaggttctgtaatca 642
Query: 61 ttgagaagagtttttgctatcc----tatgtttttttttttcttattccagatgaatttg 116
|||||||||||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 641 ttgagaagagtttttgctatcctgggtttttttttttttttcttattccagatgaatttg 582
Query: 117 caaatttccctttctaattcgttgaagaattgagttggaatgtttacaaagtatatttga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caaatttccctttctaattcgttgaagaattgagttggaatgtttacaaagtatatttga 522
Query: 177 tattatatttaaaattattgcttaaagtcttacttttattttatgaactcttttgaagta 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tattatatttaaaattattgcttaaagtcttacttttattttatgaactcttttgaagta 462
Query: 237 ctttaaatttgaaatttaatactctacccctaagcatttgtgtcctatattaacttttgg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctttaaatttgaaatttaatactctacccctaagcatttgtgtcctatattaacttttgg 402
Query: 297 ggtttt 302
||||||
Sbjct: 401 ggtttt 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
