Query= MSMg01no480_n05.b1 MSMg01no480_n05.b1 CHROMAT_FILE:
MSMg01no480_n05.b1 PHD_FILE: MSMg01no480_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:15 2005
(647 letters)
>mm_chrX_141540889_141541932
Length = 1044
Score = 1191 bits (616), Expect = 0.0
Identities = 639/648 (98%), Gaps = 5/648 (0%)
Strand = Plus / Minus
Query: 1 ccactccccccagacacagcatatagattatgagctagcttaagtaagtaatcatgggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ccactccccccagacacagcatatagattatgagctagcttaagtaagtaatcatgggag 785
Query: 61 actggaggaaagtcaaagagcttctaaatatgtatttcaaagaagggcaacagatgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 actggaggaaagtcaaagagcttctaaatatgtatttcaaagaagggcaacagatgagga 725
Query: 121 cttccaaactctttctcagctttgttttcacattcacaaaggcctatcaaaaattgtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cttccaaactctttctcagctttgttttcacattcacaaaggcctatcaaaaattgtcca 665
Query: 181 tctgccaatgctttatttctatctaacaccctctggccctgatatggtactatatgttct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 664 tctgccaatgctttatttctatctaacaccctctggctctgatatggtactatatgttct 605
Query: 241 tagaatagggcttacttcaactgacagttttttttttttaatagacccatcaggagtgat 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 604 tagaatagggcttacttcaactgacag-tttttttttttaatagacccatcaggagtgat 546
Query: 301 atatctttaattcaacttcacactttaagtgtctgtcagactgtcaagtcattctaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atatctttaattcaacttcacactttaagtgtctgtcagactgtcaagtcattctaactt 486
Query: 361 ctgtgaggatgtgtcactgtaaaggaaattggttgtagcatgccactagacctcagagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctgtgaggatgtgtcactgtaaaggaaattggttgtagcatgccactagacctcagagat 426
Query: 421 tcagtcttcagggagtttgaaaattgtttcagagtgacatattccaagccacatgatctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcagtcttcagggagtttgaaaattgtttcagagtgacatattccaagccacatgatctc 366
Query: 481 ttattttcattgaaaaacagtaattcaagaaaaaaaaaaaactagacagtatgtaagttc 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 365 ttattttcattgaaaaacagtaattcaag---aaaaaaaaactagacagtatgtaagttc 309
Query: 541 atttgcttctagagacaaacctgtattgctcaataaa-aacatggaatcattatccttag 599
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 308 atttgcttctagagacaaacctgtattgctcaataaacaacatggaattattatccttag 249
Query: 600 ggatgtttacagctgtactcaaacagcacatttaaagtaaatcagagt 647
||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 248 ggatgtttacagctgtactcaaacagcccatttaaagtaaatcggagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1044
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1034
Effective search space: 658658
Effective search space used: 658658
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_n05.g1 MSMg01no480_n05.g1 CHROMAT_FILE:
MSMg01no480_n05.g1 PHD_FILE: MSMg01no480_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:15 2005
(622 letters)
>mm_chrX_141373184_141374205
Length = 1022
Score = 1141 bits (590), Expect = 0.0
Identities = 614/626 (98%), Gaps = 8/626 (1%)
Strand = Plus / Plus
Query: 1 agttttgtgaatttacttacttgctcacttttaacaaattgccttactatctttgggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttttgtgaatttacttacttgctcacttttaacaaattgccttactatctttgggcct 260
Query: 61 taatattgtcctctgtagactggagagacacaatcttaagctcatgtagtttaggattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 taatattgtcctctgtagactggagagacacaatcttaagctcatgtagtttatgattaa 320
Query: 121 tgaattttatgcatgaaaaactttcaacagagtctggcatgtcataattgcaaagaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaattttatgcatgaaaaactttcaacagagtctggcatgtcataattgcaaagaaatt 380
Query: 181 ctcagcctttgttgaaaagctgttgacattttgagtatatgatgcatggaagataccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagcctttgttgaaaagctgttgacattttgagtatatgatgcatggaagataccaaa 440
Query: 241 gtttt----atgatgttgagtgtagacaccaactgtgctttacgactttcaacaagtagc 296
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 g----caagatgatgttgagtgtagacaccaactgtgctttacgactttcaacaagtagc 496
Query: 297 ataaacttttaaagtgcagaaatattttcatttacaaaatgcataaaataatggtagtta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ataaacttttaaagtgcagaaatattttcatttacaaaatgcataaaataatggtagtta 556
Query: 357 tgtggtagatttggttcgaagtaagtaaatataggcgaagagtgccaaaaaactgcctgc 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cgtggtagatttggttcgaagtaagtaaatataggcgaagagtgccaaaaaactgcctgc 616
Query: 417 cacatagaaaaccccagaaagtgtcaactactattacatatcaggcacagtgctgagttt 476
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 617 cacatagaaaaccccagaaagtgtcaactactattacatatcaggcacggtgctgagttt 676
Query: 477 tatatgcttcgtctcatctgatactcaaaagccttgtgaggtaggtattagcattgttcc 536
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tatatgcttcgtctcatttgatactcaaaagccttgtgaggtaggtattagcattgttcc 736
Query: 537 catttcatgcaaaagaaaattgagtctcggataagttgaataacaattagtagtatgtat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 catttcatgcaaaagaaaattgagtctcggataagttgaataacaattagtagtatgtat 796
Query: 597 aaggtcacagcattcgcaagtagctc 622
||||||||||||||||||||||||||
Sbjct: 797 aaggtcacagcattcgcaagtagctc 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
