CCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCATAACTTCTATATAGAATGTGCAATTAATACAGTTCAGGATG
ATATATACTCACATTAAATTATATTATGGAGAATAAAATAACATCTCAAA
TCAAAATATAAACCTGAAATTGGGGTACCATGGGCTGTGGCTCAGGAGTA
AAGTACTTGCATAGCTTGTGAAAGGCCTGGAAAAAATAAACAAAAATAGG
AAGAAAAGGAGGAATATCTATTGACAGTACATGGATAGATGAATAGTAAG
TAACAGAAATTGGTGAATTTATGGAAACTGATAAAAAAATAGAGGAAATG
AAGGAGAGAAAGGGATAGTTTTCTGTAAAGATTCAAATGTCATCTAGGAA
GATCATCAGAGACAGACACAGAGAGAGACATAAATAGTGGTTATCAAGGG
AAAAAGACAAGCATAGATTATTGATGAAACTACATACACCCAGCATTTTA
GAAGAAATTCTTGGAATTCTTGAAAAGTCCTAAAATTAAATCAAATTTAA
GCACAAAATGTAAAAGTTTCTAAAAGTTAAAGAAACTACATTTGTGCCGG
GCACCTCATGGTACCTTCTCCAAAATTGAACATATAGTTCGTCACAAAAC
AAGCCTCAACAAATACAAGAATATTGAAATAATCCTATGTACACTATCAG
ATCACCACGGACTAAAGTTGGTCTTATCANACNAAACNAACCAAACAACC
AACAAAACCAGAAACACCCTTCTCTG

AATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTCCCCTGCACAAAATTTACTGATACAT
GAATAGACAGGTATATATTTTATGCTAATTCCATTGTATTTAAATGTATT
CATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTG
ATTACTTACTTATTTACATTTTTTACACTACAGATTGTATTCCCCTCCTG
GTCCACCCTCTGAATGTTCCACATCCCATGCCTCATCCCTGCTCCCTTGT
GTCTACAAGAATGATCTCCTCACACACTCACCACCAGACCTCTTAACAAC
CCTGGGTCCTCCAGTCTCTTGAGGGTTAGGTACATCATCTCTGTCTGAAC
TGAGGTCTGGAAGTCCTCTGCTGTGTAAGTGTTGGGGTGGGGGTATATTA
GCCGGTGTGTGCTGTCTGTTTGGTGATTCAGTCTTAGAGATCTCTGGAGT
GCAGGTTAATTGAGACTGCTTCTCCTCCTACAGAGTTGCCCTTCTATTCA
GCTTCTTCCAGCTTTTCCATAATTCACCCGCAGAGGTCAGCAGCTTCTGT
CCATGCTGGGTGCAAATATCTGCATCTGACTCTTTCAGCTGCTATGGGGT
CATTCGGAGTGCAGTCATGATAGGTCCATTTTTGTGAGCACTCTATAGCC
TTANAGATAGCGTCAGCCCTTGGGGCTTCCTTTGTAACGGATCCCACTTG
GGCCTTGTTGCTG

Query= MSMg01no481_g22.b1 MSMg01no481_g22.b1 CHROMAT_FILE:
MSMg01no481_g22.b1 PHD_FILE: MSMg01no481_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:04 2005
         (556 letters)



>mm_chrX_128637610_128638566
          Length = 957

 Score =  988 bits (511), Expect = 0.0
 Identities = 543/557 (97%), Gaps = 9/557 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatcataac----ttctatatagaatgtgcaattaatacagttcaggatgatata 60
           ||||||||||||||    |   ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcataacaaaat---atatagaatgtgcaattaatacagttcaggatgatata 261

                                                                       
Query: 61  tactcacattaaattatattatggagaataaaataacatctcaaatcaaaatataaacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tactcacattaaattatattatggagaataaaataacatctcaaatcaaaatataaacct 321

                                                                       
Query: 121 gaaattggggtaccatgggctgtggctcaggagtaaagtacttgcatagcttgtgaaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaaattggggtaccatgggctgtggctcaggagtaaagtacttgcatagcttgtgaaagg 381

                                                                       
Query: 181 cctggaaaaaataaacaaaaataggaagaaaaggaggaatatctattgacagtacatgga 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 382 cctggaaaaaataaacaaaaataggaagaaaaggaggaatatctattgacggtacatgga 441

                                                                       
Query: 241 tagatgaatagtaagtaacagaaattggtgaatttatggaaactgataaaaaaa-tagag 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 442 tagatgaatagtaagtaacagaaattggtgaatttatggaaactgataaaaaaaatagag 501

                                                                       
Query: 300 gaaatgaaggagagaaagggatagttttctgtaaagattcaaatgtcatctaggaagatc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 502 gaaatgaaggagagaaagggatagttttctgtaaagattcaaatgtcatctagaaagatc 561

                                                                       
Query: 360 atcagagacagacacagagagagacataaatagtggttatcaagggaaaaagacaagcat 419
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 562 atcagagacagacacagagagagacataaatagtggttatcaagggaaaa-gacaagcat 620

                                                                       
Query: 420 agattattgatgaaactacatacacccagcattttagaagaaattcttggaattcttgaa 479
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agattattgacgaaactacatacacccagcattttagaagaaattcttggaattcttgaa 680

                                                                       
Query: 480 aagtcctaaaattaaatcaaatttaagcacaaaatgtaaaagtttctaaaagttaaagaa 539
           |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 681 aagtcctaaaattaaatcaaatttaatcacaaaatataaaagtttctaaaagttaaagaa 740

                            
Query: 540 actacatttgtgccggg 556
           |||||||||||||||||
Sbjct: 741 actacatttgtgccggg 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 957
Length adjustment: 10
Effective length of query: 546
Effective length of database: 947
Effective search space:   517062
Effective search space used:   517062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)