Query= MSMg01no482_c11.b1 MSMg01no482_c11.b1 CHROMAT_FILE:
MSMg01no482_c11.b1 PHD_FILE: MSMg01no482_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:00 2005
(648 letters)
>mm_chrX_148350475_148351522
Length = 1048
Score = 1245 bits (644), Expect = 0.0
Identities = 647/648 (99%)
Strand = Plus / Plus
Query: 1 ctaccttcaacaagcagtgaagaagaagatccccttgctggtaagtttctgtttccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaccttcaacaagcagtgaagaagaagatccccttgctggtaagtttctgtttccaaaa 260
Query: 61 aaatcattgcttggacagacataaccctccaaacactttcctccaggtcggtgtgtgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatcattgcttggacagacataaccctccaaacactttcctccaggtcggtgtgtgagt 320
Query: 121 cgggggtgggggttgttgaagatagactagcaataagaggatgcaggtgttgcgcgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgggggtgggggttgttgaagatagactagcaataagaggatgcaggtgttgcgcgtaat 380
Query: 181 ggaatgagttcaggcttagaagtcaggttagccttagctcactcattctctacttttata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaatgagttcaggcttagaagtcaggttagccttagctcactcattctctacttttata 440
Query: 241 aaataggaccattatttaatatctctaatcctcattgacagacactatgttagtcagttt 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 aaataggaccattatttaatatctctaatcctcattgacaaacactatgttagtcagttt 500
Query: 301 tccattgctgaatcaaatgtctgaaatagccaacttttaaaagaaacgataagcttagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccattgctgaatcaaatgtctgaaatagccaacttttaaaagaaacgataagcttagct 560
Query: 361 cacagttacagagttttcagtctttggtcagttgtttcttggtctctgtagtaagagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagttacagagttttcagtctttggtcagttgtttcttggtctctgtagtaagagact 620
Query: 421 actatataatggtggccacacacaatctacatgaaagtctttataaaggttgacttgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actatataatggtggccacacacaatctacatgaaagtctttataaaggttgacttgaca 680
Query: 481 gtgtataccactaatgaactttttaaatttatttgagctgttgaactatttgaagcttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtataccactaatgaactttttaaatttatttgagctgttgaactatttgaagcttag 740
Query: 541 gaagatgggttatggctcttctctatatctttgcaagcagtggaaacacaaatggctgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagatgggttatggctcttctctatatctttgcaagcagtggaaacacaaatggctgat 800
Query: 601 tttcctcaacccatgatttgtgtttcttttctctgagtatacctttga 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttcctcaacccatgatttgtgtttcttttctctgagtatacctttga 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_c11.g1 MSMg01no482_c11.g1 CHROMAT_FILE:
MSMg01no482_c11.g1 PHD_FILE: MSMg01no482_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:00 2005
(539 letters)
>mm_chrX_148525651_148526588
Length = 938
Score = 975 bits (504), Expect = 0.0
Identities = 530/542 (97%), Gaps = 7/542 (1%)
Strand = Plus / Minus
Query: 1 tggtcattggtgtgagggacattacaaccaaatcagggcagtgacagaggatgactggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tggtcattggtgtgagggacattacaaccaaatcagggcagtgacagaggatgactggta 522
Query: 61 gacttgacagacagggggaaaaaaactggacctgttgggatcagctatgatgagacagag 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 521 gacttgacagacagggggaaaacaactggacctgttgggatcagctatgatgagacagag 462
Query: 121 tttgtcctgtacataagacagagggcagagtagggtatgctacatgggcataaatgtatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 461 tttgtcctgtacataagacagagggcagagtagggtatgctacatgggcataaatgtaag 402
Query: 181 aaaaacatgcaccagagaaactctaagggatatgggataggacaggcagaaagacctttc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 401 aaaaacatgcaccagagaaactctaagggatatgggataggacaggcaaaaagacctttc 342
Query: 241 t---ggattttgtagggattcaggttaagactcactgtgtgactttggtcaatcatgttg 297
| ||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tggagga----ggagggattcaggttaagactcactgtgtgactttggtcaatcatgttg 286
Query: 298 tatttttctggtcctttagtttccacttgctaagtcagaagacagacacaaactatgagg 357
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 285 tatttttctggtcctttagtttccacttgctaagtcagaagacagagacaaactatgagg 226
Query: 358 actgcattacataagaggatgctaagggctggcaggatggctcagcacttacaatgctgc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 actgcattacataagaggatgctaagggctggcaggatggctcagcacttacaatgctgc 166
Query: 418 ctgatgatctgaggtcaagctcaggaccaacatgatagaaggaacaagcaagtccaatag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ctgatgatctgaggtcaagctcaggaccaacatgatagaaggaacaagcaagtccaatag 106
Query: 478 ttgtcctctgaacttcacatgtgctccatagcatatatgtacacacacacacacacacac 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 ttgtcctctgaacttcacatgtgctccatagcatatatgtacacacacacacacacacac 46
Query: 538 ac 539
||
Sbjct: 45 ac 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 938
Length adjustment: 10
Effective length of query: 529
Effective length of database: 928
Effective search space: 490912
Effective search space used: 490912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
