Query= MSMg01no483_i21.b1 MSMg01no483_i21.b1 CHROMAT_FILE:
MSMg01no483_i21.b1 PHD_FILE: MSMg01no483_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:48 2005
(602 letters)
>mm_chrX_118758578_118759579
Length = 1002
Score = 1137 bits (588), Expect = 0.0
Identities = 597/600 (99%)
Strand = Plus / Plus
Query: 1 gtgcttaagtgcatttaaagtattgttttgttattcccaagaaaaaagtgccacattgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgcttaagtgcatttaaagtattgttttgttattcccaagaaaaaagtgccacattgca 260
Query: 61 tccctgattaggtcttgcaataatggtagcatgattagttggctttacaggtgaatagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccctgattaggtcttgcaataatggtagcatgattagttggctttacaggtgaatagga 320
Query: 121 ctattaattcattttgtcccttggtaacttacttttaaatgcctcagatactacaaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctattaattcattttgtcccttggtaacttacttttaaatgcctcagatactacaaaagt 380
Query: 181 aaatctcctgggaggaagcattcaggtcagtgtgggaagcggtttcctctgtgcctgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatctcctgggaggaagcattcaggtcagtgtgggaagcggtttcctctgtgcctgagt 440
Query: 241 ggcttaattgttaaacaagcaatgtgcgcatgtgtgagagtgttttcatgccaagtcacg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcttaattggtaaacaagcaatgtgcgcatgtgtgagagtgttttcatgccaagtcacg 500
Query: 301 gtccatcctggggggtggtgatgaggctctgggagagcagccaatcaggtgtggacatgc 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtccatcctggggcgtggtgatgaggctctgggagagcagccaatcaggtgtggacatgc 560
Query: 361 cacactaaggtgtatataagcagcgcctttttggtgtttcgggttttcctcttcatgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacactaaggtgtatataagcagcgcctttttggtgtttcgggttttcctcttcatgttg 620
Query: 421 aaactggtgtaataaagttgctgcagaaggatccggtttctcactcatgtgttcttgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaactggtgtaataaagttgctgcagaaggatccggtttctcactcatgtgttcttgctg 680
Query: 481 gcaaggcaatagcgcgtgtgagaggtcagtttcatctcagttatttcaagtccaaagtct 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaaggcaatagcgcatgtgagaggtcagtttcatctcagttatttcaagtccaaagtct 740
Query: 541 gacctgtgttgtttcgatttgctcagcaattgcaacctacaaatgactaacaggatgtct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gacctgtgttgtttcgatttgctcagcaattgcaacctacaaatgactaacaggatgtct 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_i21.g1 MSMg01no483_i21.g1 CHROMAT_FILE:
MSMg01no483_i21.g1 PHD_FILE: MSMg01no483_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:48 2005
(366 letters)
>mm_chrX_118919677_118920442
Length = 766
Score = 698 bits (361), Expect = 0.0
Identities = 364/365 (99%)
Strand = Plus / Minus
Query: 1 caactgtggctatgtttatgctgcagagaataaaaacatgataacttctcagtctatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 caactgtggctatgtttatgctgcagagaataaaaacatgataacttctcagtctatgat 458
Query: 61 gctatattcctggaaagattaagaggctagttctgatggtagtgaaggatggcagcagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gctatattcctggaaagattaagaggctagttctgatggtagtgaaggatggcagcagta 398
Query: 121 ccagtagaagcagtggcaacaatagtgtacatagcaggaacagcagggatagaggttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ccagtagaagcagtggcaacaatagtgtacatagcaggaacagcagggatagaggttaac 338
Query: 181 aggcaataagtgaatctccttatatctacttactggatattgttagtcactgtggaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aggcaataagtgaatctccttatatctacttactggatattgttagtcactgtggaggga 278
Query: 241 aaacatagaaaatcatgtctatcttgatttcagagataataaaattgacaactagagcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaacatagaaaatcatgtctatcttgatttcagagataataaaattgacaactagagcta 218
Query: 301 atcagtcacaattagtaaatatatatatatatatatatatatatatatatatatatatat 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atcagtcacaattagtatatatatatatatatatatatatatatatatatatatatatat 158
Query: 361 atata 365
|||||
Sbjct: 157 atata 153
Score = 91.6 bits (47), Expect = 7e-23
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 319 atatatatatatatatatatatatatatatatatatatatatatata 365
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atatatatatatatatatatatatatatatatatatatatatatata 200
Score = 91.6 bits (47), Expect = 7e-23
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 319 atatatatatatatatatatatatatatatatatatatatatatata 365
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atatatatatatatatatatatatatatatatatatatatatatata 202
Score = 89.7 bits (46), Expect = 3e-22
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 320 tatatatatatatatatatatatatatatatatatatatatatata 365
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tatatatatatatatatatatatatatatatatatatatatatata 198
Score = 81.9 bits (42), Expect = 6e-20
Identities = 45/46 (97%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 321 atat-atatatatatatatatatatatatatatatatatatatata 365
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atattatatatatatatatatatatatatatatatatatatatata 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 42
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 10
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
