NNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCATAGGTCTATGGTTTATAGAGATTTACATGTGTATAGT
TGAATACTTGGTAACCAGTTCCAAATGCTTGGAACTGTTTGGAAAGGATT
AAGAACTGTGGCCTTGTTAAAGGATGGTTTTTACTAGGGATGGGCTTTGA
GAATTTAAAAGCCCATGCCGCCATCAAGTGAGGGATGGCATTACTACCCA
CAGTCACATCTCTGACCCATAATTGTTCCTGTCTGAAAGAATTACAGGGA
TGGAAATGGAGAGGAGCCTGAAGAAAAGAAGGTCCAGCAACAGGCCCAAA
GTGGGATCCAGCTGAAGGGGAGGTCCCAAGGCCTGACTCTATTACTGAGG
CTATGGAGAGCTCACAAAAAGGGACCTATCATGACTCTATCATTTTTCTT
ATCATATTTCTTTTTGGGAAAGACCCAAAAAGCAGCTGAAGGAGTCAGAT
GCAAATATTTGCACTCAACCAATGGACAGAAGCCCTTGACCCCTGTTGTT
GAATTATGGAAAGATGCAAGAAGCTGAGGAGGACGGCGATCCTGTAGGAG
AACAAGCAGTCTCAATTAATCTGGACCACCCCCAAGATCTCTCAAATTCT
GCACCACCAGACAACACACACCAGCTGACATGAAGCCGCCAACACACATA
CAGTAGAGGACTTCCGGGTCTGTGTTCAGTCTGAGATGATGCACTTAGGT

AAAAACCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTTTTTCAAATTTAA
ATCTTAGGCAATTTCAGGTGGCCCAAGTTATCTTTATTAAATGAATTAAG
CACTCAAAATGCTTGTAAAATATTAAGTAGTTTGTCTTATTCCAAGAATT
AGTTAGTAAATAGAATAGAGAAAGTTTAGGAAATTTGTTCAGTTTAGCAC
ACCTATTAAGCCGAATACCTGAATGATAACTCAGGTATGATTCAGGTGCT
AGATTGCCTGAGAGACTTCACACTCAAAATATATATTTTAGACAGAAAAT
CTCATATTTTTCTTTGTTTCTCTTAGTTAAAAGAATCCATTCTCATTAAT
ATCTTATGAATGAAGTGACAGGAAATTTCAAATCAGTTCTCATATTCAGT
TAACATTAAAGGTTAATATTTTACATTTTACATCTTTTTTCCCTTTTTTT
TCTTTATCTAATTTTTTTAAAGTCCAGATTTTATACTCCTCCTGGTCTAC
CATCTGACTGTTCCCTATCTCTTACCTCCTTCCCCCATCTCAACGAGGAT
GTCTCAAGCCTCCCAACCCCCACCCTGCCAGACCTCCCCACTCCTTGTGG
CCTCAAGGCTCTTGAGGTTTAGGTGCATCTTCTCCAAATGAGTCCATATC
CCGCAGTCCTCTGCTGTATCTGTGTCCAGGGCCTTGGACACATTTATG

Query= MSMg01no483_n02.g1 MSMg01no483_n02.g1 CHROMAT_FILE:
MSMg01no483_n02.g1 PHD_FILE: MSMg01no483_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:10 2005
         (665 letters)



>mm_chrX_110898015_110899078
          Length = 1064

 Score = 1247 bits (645), Expect = 0.0
 Identities = 660/665 (99%), Gaps = 1/665 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctttttcaaatttaaatcttaggcaatttcaggtggcccaagttatctttattaaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctttttcaaatttaaatcttaggcaatttcaggtggcccaagttatctttattaaatg 260

                                                                       
Query: 61  aattaagcactcaaaatgcttgtaaaatattaagtagtttgtcttattccaagaattagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattaagcactcaaaatgcttgtaaaatattaagtagtttgtcttattccaagaattagt 320

                                                                       
Query: 121 tagtaaatagaatagagaaagtttaggaaatttgttcagtttagcacacctattaagccg 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtaaatagaaaagagaaagtttaggaaatttgttcagtttagcacacctattaagccg 380

                                                                       
Query: 181 aatacctgaatgataactcaggtatgattcaggtgctagattgcctgagagacttcacac 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatacctgaatgataactcaggtgtgattcaggtgctagattgcctgagagacttcacac 440

                                                                       
Query: 241 tcaaaatatatattttagacagaaaatctcatatttttctttgtttctcttagttaaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaaatatatattttagacagaaaatctcatatttttctttgtttctcttagttaaaag 500

                                                                       
Query: 301 aatccattctcattaatatcttatgaatgaagtgacaggaaatttcaaatcagttctcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatccattctcattaatatcttatgaatgaagtgacaggaaatttcaaatcagttctcat 560

                                                                       
Query: 361 attcagttaacattaaaggttaatattttacattttacatcttttttcccttttttttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 attcagttaacattaaaggttaatattttacattttacatcttttttcccttttttt-ct 619

                                                                       
Query: 421 ttatctaatttttttaaagtccagattttatactcctcctggtctaccatctgactgttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttatctaatttttttaaagtccagattttatactcctcctggtctaccatctgactgttc 679

                                                                       
Query: 481 cctatctcttacctccttcccccatctcaacgaggatgtctcaagcctcccaacccccac 540
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catatctcttacctccttcccccatctcaacgaggatgtctcaagcctcccaacccccac 739

                                                                       
Query: 541 cctgccagacctccccactccttgtggcctcaaggctcttgaggtttaggtgcatcttct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cctgccagacctccccactccttgtggcctcaaggctcttgaggtttaggtgcatcttct 799

                                                                       
Query: 601 ccaaatgagtccatatcccgcagtcctctgctgtatctgtgtccagggccttggacacat 660
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ccaaatgagtccagatcccgcagtcctctgctgtatctgtgtccagggccttggacacat 859

                
Query: 661 ttatg 665
           |||||
Sbjct: 860 ttatg 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1064
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1054
Effective search space:   690370
Effective search space used:   690370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)