Query= MSMg01no484_e21.b1 MSMg01no484_e21.b1 CHROMAT_FILE:
MSMg01no484_e21.b1 PHD_FILE: MSMg01no484_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:49 2005
(582 letters)
>mm_chrX_21824793_21825774
Length = 982
Score = 1087 bits (562), Expect = 0.0
Identities = 571/574 (99%)
Strand = Plus / Minus
Query: 5 gaattcttcctctcaaatccagggggcttggtctcagacactcccactggcatctcttaa 64
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 778 gaattcttcctctgaaatccaggggacttggtctcagacactcccactggcatctcttaa 719
Query: 65 tttgtcctctagctcagtccagcctctgcttgtttcccaagtggcagcagcagaggtaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tttgtcctctagctcagtccagcctctgcttgtttcccaagtggcagcagcagaggtaga 659
Query: 125 acaggtttctacagttcctgccctgagctgttctagagctagctggagaggtaaccaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 acaggtttctacagttcctgccctgagctgttctagagctagctggagaggtaaccaatt 599
Query: 185 ccaccgcaggaagctccttcctcataagttcagaccaagagctgacccctctgagtatag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ccaccgcaggaagctccttcctcataagttcagaccaagagctgacccctctgagtatag 539
Query: 245 taagtatcctgtcattcaaagacctggggactggtactgtgatgcgtgtaatgtgataaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 taagtatcctgtcattcaaagacctggggactggtactgtgatgcgtgtaatgtgataaa 479
Query: 305 cttctcttggcgaaatgtgtgtttccgatgtaagcaattccaggaaaaaaaggtaattgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttctcttggcgaaatgtgtgtttccgatgtaagcaattccaggaaaaaaaggtaattgg 419
Query: 365 aggcattttacacaattggacatatctgtgatttaatgaatttacacccagtttcctttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aggcattttacacaattggacatatctgtgatttaatgaatttacacccagtttcctttc 359
Query: 425 tgctgctaaagggaataagaacattttcttgcccattagacactgcataaagagaacaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgctgctaaagggaataagaacattttcttgcccattagacactgcataaagagaacaaa 299
Query: 485 gcaaaatggaataaaatatgagtaaaggccacctttaaccttgccattgagaaagtttag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gcaaaatggaataaaatatgagtaaaggccacctttaaccttgccattgagaaagtttag 239
Query: 545 cttaatttctgtttacttctaaccataagtatgg 578
|||||||||||||||||||||||||||| |||||
Sbjct: 238 cttaatttctgtttacttctaaccataactatgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_e21.g1 MSMg01no484_e21.g1 CHROMAT_FILE:
MSMg01no484_e21.g1 PHD_FILE: MSMg01no484_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:49 2005
(598 letters)
>mm_chrX_21675866_21676864
Length = 999
Score = 1064 bits (550), Expect = 0.0
Identities = 586/600 (97%), Gaps = 7/600 (1%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgttagccattttttgattaggagtatttggttctctggagtctaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tttgtttagctctgttagccattttttgattaggagtatttggttctctggagtctaact 264
Query: 61 tcttaagttttgtatatattggatattagccatattgtatgtaggattgttaaagatctt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttgagttttgtatatattggatattagccatattgtatgtaggattgttaaagatctt 324
Query: 121 ttcccaatctgttgattgctgttttgtcctattgacagtgtcctttgccttatagaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcccaatctgttgattgctgttttgtcctattgacagtgtcctttgccttatagaagct 384
Query: 181 ttgcaattttgtgaggtcccgttgtggatggtaggggaacaccctcatagaagcagggta 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgcaattttatgaggtcccgttgtggatggtaggggaacaccctcatagaagcagggta 444
Query: 241 ag-ggggtgggataggggatttgcagaggggaaaccagaaaaggggataacatttgatat 299
|| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 445 agtggggtgggataggggatttgcaaaggggaaaccagaaaaagggataacatttgatat 504
Query: 300 gtaaacaaataaaatatccaattaaaaaataaaataaaataaaataaacatattcaagaa 359
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 505 gtaaacaaataaaatatccaat-aaaaaa----ataaaataaaataaacatattcaagaa 559
Query: 360 agtcaacaacaacaacaacaacaaaagtcggaaagcttcagtcatgaagtgcaggctgag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtcaacaacaacaacaacaacaaaagtcggaaagcttcagtcatgaagtgcaggctgag 619
Query: 420 agttaatgtgtccccacaagggacctttttctagcgcggaaggaggagccctttgatttg 479
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 620 agttaatgtgtccccacaagggacctttttctagcacggaagaaggagccctttgatttg 679
Query: 480 caaaacatcatacaaggtcttttctctggagaaagcatttgtttacctagagatcctc-c 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 680 caaaacatcatacaaggtcttttctctggagaaagcatttgtttacctagagatcctctc 739
Query: 539 ccagcagggaaggaggaatcttttgacaggagatactatttgtgaatgaggacttcctgg 598
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccagcagggaaggcggaatcttttgacaggagatactatttgtgaatgaggacttcctgg 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space: 581532
Effective search space used: 581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
