NAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATGC
GCGGAATTCTTTGTTTTGCTCTGAGCCCCATATTTTAATGGGGTTATTAG
ATTTTCTGGAGTCCACCTTTTGTGTTCTTTGTATATATTGGATATTAGTT
CCCTATCTGATTTAGGATAGGTAAAGATCCTTTTCCAATCTGTTAGTGGC
CTTTTTGTCTTATTGACGGTGTCTTTTGCCTTAGAGAAGCTTTGCAGTTT
CATGAGGTCCCATTTGTTAATTCTCGATCTTACAGCACAAGCCACTGCTG
TTCTATTAAGGAATTTTTCCTCTGTACCCATATCGTCGAGGCTTTTCCCC
ATTTTCTCCTTTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTCCTG
GATCCACTTAGATTTGACATTAGTACAAGGAGATAGGAATTAGCATTCTT
CTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTC
TCTTTTCCACTGGATGGTTTTAGCTCCCATGTCAAAGATCAAGTGACCAT
AGGTGTGTGGGTACATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACT
TGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTA
GTATAGCTTTAGGTCAGGCATGGTGATTCCACAGAGGTTCTTTTATCCTT
TGAGACAGTTTTTGCTTTCCTAGGTTTTTTTGGTAT

NTCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGCCATAAATTCGAAACTA
TACTCTTAGAACCAAGGGGTTACGTCAGAAAAGGAAAGCAAGAAACATCT
TCCAAGATAACCAAAGAGTAACACATGCTATCTTTGAGGCTGCCAGTCAT
ATGACTCAAGGCTATAGTAGTAACAACAGAAAGTAGATGAATTTAAGTTG
ACTGTCCTCAAAATGATTGCTAAACAGAACTGGTTTTCTGATTAGTAAAA
GTTGAGAAAAATAAGGAAACATACCTTCTGGTCCCTCTATGCCGCCTCTA
TGCTTCACTTGCTGTCCATATTTCTGCAAATTTCATTATGCTTTAGATAG
TTATAGTGTTCCTGCTTTGGGGAATTCATGGGACTTTGTAAATAGTGTTA
GAAGGGTAAACACCTCACTAGTATTAGCCATGGCTGCCTATGCATAGAGG
TTGGTGTAATTGGTATTGTATTTAATCAACAATGTACTTTGGAAAGTGGG
TTTAGGAGTTCTGAGAAATTGTGACACATAGCAAACTTTTTCTAGAATAA
GCCAAGTACATCTTGCTTCTTTGCTTTTCAAGAAGTCTAGGGCCCCCTTT
TCTTTGACACTGACAACATGGTGACCACACCCATATAGTATAGGAGAGAC
ACACTAGGCTGGGAGCTGAGAACTTATCTTTAAGCTTCATCTCTGCCATA
TCTN

Query= MSMg01no486_f12.g1 MSMg01no486_f12.g1 CHROMAT_FILE:
MSMg01no486_f12.g1 PHD_FILE: MSMg01no486_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:38 2005
         (557 letters)



>mm_chrX_36640837_36641793
          Length = 957

 Score = 1054 bits (545), Expect = 0.0
 Identities = 554/557 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagccataaattcgaaactatactcttagaaccaaggggttacgtcagaaaaggaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aagagccataaattcgaaactatactcttagaaccaaggggttacatcagaaaaggaaag 260

                                                                       
Query: 61  caagaaacatcttccaagataaccaaagagtaacacatgctatctttgaggctgccagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagaaacatcttccaagataaccaaagagtaacacatgctatctttgaggctgccagtc 320

                                                                       
Query: 121 atatgactcaaggctatagtagtaacaacagaaagtagatgaatttaagttgactgtcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgactcaaggctatagtagtaacaacagaaagtagatgaatttaagttgactgtcct 380

                                                                       
Query: 181 caaaatgattgctaaacagaactggttttctgattagtaaaagttgagaaaaataaggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaatgattgctaaacagaactggttttctgattagtaaaagttgagaaaaataaggaa 440

                                                                       
Query: 241 acataccttctggtccctctatgccgcctctatgcttcacttgctgtccatatttctgca 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 acataccttctggtccctctatgctgcctctatgcttcacttgctgtccatatttctgca 500

                                                                       
Query: 301 aatttcattatgctttagatagttatagtgttcctgctttggggaattcatgggactttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatttcattatgctttagatagttatagtgttcctgctttggggaattcatgggactttg 560

                                                                       
Query: 361 taaatagtgttagaagggtaaacacctcactagtattagccatggctgcctatgcataga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatagtgttagaagggtaaacacctcactagtattagccatggctgcctatgcataga 620

                                                                       
Query: 421 ggttggtgtaattggtattgtatttaatcaacaatgtactttggaaagtgggtttaggag 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttggtgtaattggtgttgtatttaatcaacaatgtactttggaaagtgggtttaggag 680

                                                                       
Query: 481 ttctgagaaattgtgacacatagcaaactttttctagaataagccaagtacatcttgctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctgagaaattgtgacacatagcaaactttttctagaataagccaagtacatcttgctt 740

                            
Query: 541 ctttgcttttcaagaag 557
           |||||||||||||||||
Sbjct: 741 ctttgcttttcaagaag 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space:   518009
Effective search space used:   518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)