Query= MSMg01no486_l07.b1 MSMg01no486_l07.b1 CHROMAT_FILE:
MSMg01no486_l07.b1 PHD_FILE: MSMg01no486_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:05 2005
(501 letters)
>mm_chrX_10911630_10912530
Length = 901
Score = 915 bits (473), Expect = 0.0
Identities = 494/501 (98%), Gaps = 1/501 (0%)
Strand = Plus / Plus
Query: 1 ggccttcagacatacatgcaggtaaaatacttatatacataaaataatattttctataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggccttcagacatacatgcaggtaaaatacttatatacataaaataatattttctataaa 260
Query: 61 agaaaatataggcaagaagccttacaggttaggttttgagtgctcgtggtttatttgtga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 agaaaatataggcaagaagccttacaggttaggttttgagtgcccgtggtttatttgtga 320
Query: 121 ccccattctagtaaccatcaagaggagctgtggtagaagataaacaggatgggacggtac 180
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccattctagtaaccatcaggaggagctgtggtagaagataaacaggatgggacggtac 380
Query: 181 agatgctagatgctagattacctgtccctctggggagttctgggggacaggctagaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgctagatgctagattacctgtccctctggggagttctgggggacaggctagaatgg 440
Query: 241 gctccagttatcccactctagggccaggacagatggggcattaacccactgtattaatcc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gctccagttatcccactctagggccaggacagatggggaattaacccactgtattaatcc 500
Query: 301 tgtccggcagcagcaaaggtttctccaagggttatagggctgacttcacccttcctccac 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtccagcagcagcaaaggtttctccaagggttatagggctgacttcacccttcctccac 560
Query: 361 ttgccctgtgcacaagaaagacactcttatgccagagtaaggcataccagccaaagcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgccctgtgcacaagaaagacactcttatgccagagtaaggcataccagccaaagcctg 620
Query: 421 caggtggaaaggcaggtgctaacagcaaggtgtctaatagacatgcacaaaaatgcctta 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 caggtggaaaggcaggtgctaacagcaaggtgtctaatagacatgcacaaaaatgcctaa 680
Query: 481 ttcccacagagatatggtcag 501
| |||||||||||||||||||
Sbjct: 681 t-cccacagagatatggtcag 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_l07.g1 MSMg01no486_l07.g1 CHROMAT_FILE:
MSMg01no486_l07.g1 PHD_FILE: MSMg01no486_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:05 2005
(109 letters)
>mm_chr16_54202699_54203207
Length = 509
Score = 186 bits (96), Expect = 4e-52
Identities = 105/108 (97%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 1 ccaaactggtcccagcccaccctcacctgctgtggatatgtctgagacatttatgatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccaaactggtcccagcccaccctcacctgctgtggatatgtctgagacatttatgatatg 248
Query: 61 ttgacagtttgaaccctaacacataccct-gctgatgggttacaatta 107
||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 247 ttgacagtttgaaccctaacacata-gctggctgatgggttacaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
