TTTTGTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCACCTTTTGCATACCGAATGGCAGAGAAACACCTGA
AAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAGATCAAAACAACC
CTGAGATTCTACCTCACACCAGTCAGAATGGCTCAGATCAAAAATTCAGG
TGACAGCAGATGCTGGCTAGGATGTGGAGAAAGAGGAACACTCCTCCATT
GTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGG
TTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCT
CCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAA
CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGCCAAATGGATGGTCCTGGAGGGCATCATCCTGAGTGAGGTAACACAT
TCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCC
CCAAACCTAGGATACCAAAGATATAAGATTCAATTTGCTTAACACATGAA
ACTCAAGAACAATGAAGACTGAAGTG

CACGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGTTCAATAGGTTAAGTATA
TTTAAATTAAATATACTGAAGATTTATTCTTGAGATGGGATTTTCATTTA
ATCACATTTTCAAGTCCTTCTTCATTAGTGGGTATTTATAAATGAACAAG
ATCATACACTGTAAGATTTAATTAGTTTATTGCATGTGTGATAACATGAC
ATAAAAGAAAACAATGTTCTTTTCTTAGTCCAAGTCACTTACAAAATAAG
CTTCAGGGAAAAAATGGCCTTCAGGAAATAACCTTATCACATAAACAAGC
GCTGCCATTTCTAAGTTTTTAGCACATTCTAAAGTGATCGTGCGTTTTCT
GCCTGCCCAAATCCATGGGAGTAATTAAAATAGTTTTGCCATATTAGCAA
CCCTTTGTAAAAGACTAAAAAGCTCAGTGTTTGTTTCTTCAGCAACCAAC
TTCTCAATTGGAGTAGCTGGCACTTAATGTGAATTCTTATCATATATTCT
AATCCACAGATTGAATGACAATTTAAGTAGGATTCTTGTTTCATGACTGT
GTCCCTATTTTCTTTTTTAACATTTATTTCATTGTTTTGGGAATTTCATA
CATAAATAGTGTGTTTCCCTCATTTTCACCCCACATTCTCCCTATTTTAA
CTCTGGTAACCCTCCACTCCTTCTCAATTCATGACCTCTCT

Query= MSMg01no487_k11.g1 MSMg01no487_k11.g1 CHROMAT_FILE:
MSMg01no487_k11.g1 PHD_FILE: MSMg01no487_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:19 2005
         (613 letters)



>mm_chrX_165872511_165873523
          Length = 1013

 Score = 1139 bits (589), Expect = 0.0
 Identities = 607/613 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagttcaataggttaagtatatttaaattaaatatactgaagatttattcttgagatgg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aaagttcaataggttaagtatatttaaattaaatatactgaagatttattctcgagatgg 260

                                                                       
Query: 61  gattttcatttaatcacattttcaagtccttcttcattagtgggtatttataaatgaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattttcatttaatcacattttcaagtccttcttcattagtgggtatttataaatgaaca 320

                                                                       
Query: 121 agatcatacactgtaagatttaattagtttattgcatgtgtgataacatgacataaaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatcatacactgtaagatttaattagtttattgcatgtgtgataacatgacataaaaga 380

                                                                       
Query: 181 aaacaatgttcttttcttagtccaagtcacttacaaaataagcttcagggaaaaaatggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacaatgttcttttcttagtccaagtcacttacaaaataagcttcagggaaaaaatggc 440

                                                                       
Query: 241 cttcaggaaataaccttatcacataaacaagcgctgccatttctaagtttttagcacatt 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcagaaaataaccttatcacataaacaagcgctgccatttctaagtttttagcacatt 500

                                                                       
Query: 301 ctaaagtgatcgtgcgttttctgcctgcccaaatccatgggagtaattaaaatagttttg 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaaagtgattgtgcgttttctgcctgcccaaatccatgggagtaattaaaatagttttg 560

                                                                       
Query: 361 ccatattagcaaccctttgtaaaagactaaaaagctcagtgtttgtttcttcagcaacca 420
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatattagcaaccctctgtaaaagactaaaaagctcagtgtttgtttcttcagcaacca 620

                                                                       
Query: 421 acttctcaattggagtagctggcacttaatgtgaattcttatcatatattctaatccaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttctcaattggagtagctggcacttaatgtgaattcttatcatatattctaatccaca 680

                                                                       
Query: 481 gattgaatgacaatttaagtaggattcttgtttcatgactgtgtccctattttctttttt 540
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 gattgaatgacaatttaagtaggatttttgtttcatgactgtgtccctattttctttttt 740

                                                                       
Query: 541 aacatttatttcattgttttgggaatttcatacataaatagtgtgtttccctcattttca 600
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 741 aacatttatttcattgttttgggaatttcatacataaatagtgtgtttccatcattttca 800

                        
Query: 601 ccccacattctcc 613
           |||||||||||||
Sbjct: 801 ccccacattctcc 813


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)