Query= MSMg01no489_c16.b1 MSMg01no489_c16.b1 CHROMAT_FILE:
MSMg01no489_c16.b1 PHD_FILE: MSMg01no489_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:18 2005
(660 letters)
>mm_chrX_17798193_17799252
Length = 1060
Score = 1237 bits (640), Expect = 0.0
Identities = 652/656 (99%)
Strand = Plus / Plus
Query: 5 gaattctcagtcttactttctaaccttgatgcctctacccacagatatacaatcttcctc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagtcctactttctaaccttgatgcctctacccacagatatacaatcttcctc 264
Query: 65 tcattgagcttgcattgattttgaaacagttttgaatatgaattttatcttatccctatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcattgagcttgcattgattttgaaacagttttgaatatgaattttatcttatccctatt 324
Query: 125 tttttctgttagccctttcacctttctctcgtattatacactcctcagacccacttaaat 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 tttttctgttagccctttcacctttctctcgtattatacattcctcagacccacttaaat 384
Query: 185 atcatctaacacatagatgcctatttcttaaggaagaaagtcaagtactgtcataagcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcatctaacacatagatgcctatttcttaaggaagaaagtcaagtactgtcataagcag 444
Query: 245 gaatataggtctgatgctgaacctatgttcttcctgccaaataaactacctggtagaagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaatataggtctgatgctgaacctatgttcttcctgccaaataaactacctggtagaagt 504
Query: 305 ctttaatattataaataagcacatatataagtagtcatttttagattagcctaagtatga 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 ctttaatattataaataagcacatatataagtagtcatttttagactagcctaagtatga 564
Query: 365 tccttcagaataaaactactaaaacacatgaagtattttatggcataatattttgcataa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccttcagaataaaactactaaaacacatgaagtattttatggcataatattttgcataa 624
Query: 425 acaattagcttttattttggaaaatctaagattcaaaatactcaccgttaatgtttataa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaattagcttttattttggaaaatctaagattcaaaatactcaccgttaatgtttataa 684
Query: 485 cactagtgttagctcttaaaaatctttgcaaataatatatattatatttgatagaggttt 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tactagtgttagctcttaaaaatctttgcaaataatatatattatatttgatagaggttt 744
Query: 545 ttaaacaatagaaggttttaaaaactacctaatatgatttcagtatattattttttgtta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttaaacaatagaaggttttaaaaactacctaatatgatttcagtatattattttttgtta 804
Query: 605 ttttactgtgtcctgctattaaattacaaatatttgcaacatttttatttgtaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttttactgtgtcctgctattaaattacaaatatttgcaacatttttatttgtaaac 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_c16.g1 MSMg01no489_c16.g1 CHROMAT_FILE:
MSMg01no489_c16.g1 PHD_FILE: MSMg01no489_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:18 2005
(577 letters)
>mm_chrX_17899587_17900563
Length = 977
Score = 857 bits (443), Expect = 0.0
Identities = 466/479 (97%), Gaps = 9/479 (1%)
Strand = Plus / Minus
Query: 1 ccacccaagctggtggcagtggtgtcaggtggctgctggaaagcaggaagaacatgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccacccaagctggtggcagtggtgtcaggtggctgctggaaagcaggaagaacatgatgg 411
Query: 61 gggtgggtcagatggccgagggaaagcagagactcagcagaacaggggtccaggcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gggtgggtcagatggccgagggaaagcagagactcagcagaacaggggtccaggcagaac 351
Query: 121 actgaaatgcgggggtgtgaggggagctgcttttccttggtggcagaatcaaggggcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 actgaaatgcgggggtgtgaggggagctgcttttccttggtggcagaatcaaggggcagg 291
Query: 181 gtggcgccaggcccacagggccgagattcctcctccccagcatgacacagaagtgcacgt 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 290 gtggcgccaggcccacagggccgagcttcctcctccccagcatgacacagaagtgcacgt 231
Query: 241 ggtgtttgcagggttatggctgcttttcctgcagcagcagcagcagcagcagcagcagca 300
|||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 230 ggtggaggcagggttatggctgcttttcct---------gcagcagcagcagcagcagca 180
Query: 301 gcagcagaatcaagggactgtgaacgaggagcagagcaagagcagagcaagtggcaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gcagcagaatcaagggactgtgaacgaggagcagagcaagagcagagcaagtggcaagag 120
Query: 361 aatgggagggggaggtaaaagcctacggatcgccaatgaaagagttgcttttaaagtgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aatgggagggggaggtaaaagcctacggatcgccaatgaaagagttgcttttaaagtgtc 60
Query: 421 agttaagtggccatgtagagacattgcttgctgggtactgtgaattagacctagagaca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 agttaagtggccatgtagagacattgcttgctgggtactgtgaattagacctagagaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
