XXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAATTCCATGTTT
TTTGCCATTTTATATTGGCTATTCTAAGATTGTGGGCTAATATCCTCTTA
TCAGTGAGTACATATCAAGTGACTTCTTTTGTGATTGGTTTACCTCACTC
AGGATGATACCCTCCAGATCAATCCATTTGCCTAAAAATTTCATAAATTC
ATTGTTTTTAATAGCTGAGTAGTACTCAAGTGTGTAAATGTACTACATTT
TCTAAATCTATTCCTCTGTTGAGGGACATCTGGGTTCCTTCCAGCTTCTG
GCTATTATAAATAATGCTGCTATGAACATAGTGGAGCATGTATTCTTATT
ACCAGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGAT
AGTCCTGTAGTACTATGTTCAGATTTCTGAGGAACAACCAGAATGATTTC
CAGACTGTTTGCACGAGCTTGTAATCCCACCAACAATGAAGGAATGTTCC
TCTTTCTCCACATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTGATCT
TAGCCATTCTGACTGCTGTTAGTTAGAATCTCAGGGTTGTTTTGATTTGT
ATTTCCCAGATGATTAAGGATGTAGAAAAATTTTATGTGCTTCTTATCCA
TTCAGAATTCCTCAATTGAAAATTCTTTGTTTAGCTCTGTGCCCCATTTT
TTTAATGGGGTTATTTGATTTTCTGGAGTCCAGCTTCTTGAGTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XTTTCCGAATTCTTTGTTTTGATCCTAAGATCATCTCAAGTGCTTTCTCA
ACACTGTAACCTTTTCTCATAAATACACAGTAAAATGTAATTGGATTCTG
TATACCTTTACACTGCTAACAGCCTAAATATACCTTTTCAATTAACTTTC
TTATTTACTGTTCAGAAAAAAATTAAGACAAATAATATAGTTTATTCTCA
TGTGCTGATGGGCTAAGGTACTTTAAAATTAAGTAAATTATCATCTAAGA
CACATTTGAATGGTTTTATTCATTTGAAGAAATGTATACCCGATAATAGA
ATGAAATCAAATACAGAGATATATTCCACTCAGAATTAATGCAGATAATT
TTCAAGGATTGACTAATGAGCAAAGTACAGTAAAACAAATATTATACTTT
TAAGAAGATGAAGAGATGTGTTAGAAGATAAAATCTTTATAATGAATAGG
GTGGTGTAGGGCAGGAAAAGTTGTAAAAAGATGAAGATGACTTCTAAAAT
TTTAGAAATCATAGCTCATGTCTACTGTGTGTGATTATTCAATTGTTCAT
GGCACAAGAAATTACCAAGTTGGAAAAGTGGAAGTATAAAATGAAAGCAG
TACACCCAATAACTGTTTTGTTTTTGTTTTTGTTTTTGTTTGGGGGGGTT
ATTTTTGGAAGGTATGGTATGCTATAGCAGTCAAAATTTCTAAGAGCCCT
TGT

Query= MSMg01no491_g14.g1 MSMg01no491_g14.g1 CHROMAT_FILE:
MSMg01no491_g14.g1 PHD_FILE: MSMg01no491_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:19 2005
         (605 letters)



>mm_chrX_117377420_117378424
          Length = 1005

 Score = 1123 bits (581), Expect = 0.0
 Identities = 599/605 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgttttgatcctaagatcatctcaagtgctttctcaacactgtaaccttttctcataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttgttttgatcctaagatcatctcaagtgctttctcaacactgtaaccttttctcataa 746

                                                                       
Query: 61  atacacagtaaaatgtaattggattctgtatacctttacactgctaacagcctaaatata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atacacagtaaaatgtaattggattctgtatacctttacactgctaacagcctaaatata 686

                                                                       
Query: 121 ccttttcaattaactttcttatttactgttcagaaaaaaattaagacaaataatatagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccttttcaattaactttcttatttactgttcagaaaaaaattaagacaaataatatagtt 626

                                                                       
Query: 181 tattctcatgtgctgatgggctaaggtactttaaaattaagtaaattatcatctaagaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tattctcatgtgctgatgggctaaggtactttaaaattaagtaaattatcatctaagaca 566

                                                                       
Query: 241 catttgaatggttttattcatttgaagaaatgtatacccgataatagaatgaaatcaaat 300
           |||||||||||  | ||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 565 catttgaatggcataattcatttgaagaaatgtatatccggtaatagaatgaaatcaaat 506

                                                                       
Query: 301 acagagatatattccactcagaattaatgcagataattttcaaggattgactaatgagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acagagatatattccactcagaattaatgcagataattttcaaggattgactaatgagca 446

                                                                       
Query: 361 aagtacagtaaaacaaatattatacttttaagaagatgaagagatgtgttagaagataaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagtacagtaaaacaaatattatacttttaagaagatgaagagatgtgttagaagataaa 386

                                                                       
Query: 421 atctttataatgaatagggtggtgtagggcaggaaaagttgtaaaaagatgaagatgact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atctttataatgaatagggtggtgtagggcaggaaaagttgtaaaaagatgaagatgact 326

                                                                       
Query: 481 tctaaaattttagaaatcatagctcatgtctactgtgtgtgattattcaattgttcatgg 540
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 325 tctaaaattttagaaatcatagctcatggctactgtgtgtgattattcaattgttcatgg 266

                                                                       
Query: 541 cacaagaaattaccaagttggaaaagtggaagtataaaatgaaagcagtacacccaataa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacaagaaattaccaagttggaaaagtggaagtataaaatgaaagcagtacacccaataa 206

                
Query: 601 ctgtt 605
           |||||
Sbjct: 205 ctgtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)