Query= MSMg01no492_b22.b1 MSMg01no492_b22.b1 CHROMAT_FILE:
MSMg01no492_b22.b1 PHD_FILE: MSMg01no492_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:15 2005
(379 letters)
>mm_chrX_142785032_142785810
Length = 779
Score = 582 bits (301), Expect = e-170
Identities = 319/325 (98%)
Strand = Plus / Minus
Query: 1 acacaagatctattcaaccatgcatttccttcttatactctcccatagcttatcttctcg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 acacaagatctattcaaccatgcatttccttcttatactttcccatagcttatcttctca 266
Query: 61 ttccttttcttagaagccttttgccttcattcaactctgtagctcaggatgctttatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttccttttcttagaagccttttgccttcattcaactctgtagctcaggatgctttatcac 206
Query: 121 ctcatcttctttgagttccatatatttttacactcctgcccatacataattaaatgtgat 180
||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct: 205 ctcatcttcttggagttccatatatttttactctcctgcccaaacataattaaacgtgat 146
Query: 181 tttcatgttaatctgtctattgccagtttctttcagactcattaccaaaccctaacaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tttcatgttaatctgtctattgccagtttctttcagactcattaccaaaccctaacaaga 86
Query: 241 tagaggtgaagttttgcctcctgtagaattcccagcttgcatacacttcatctcatggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tagaggtgaagttttgcctcctgtagaattcccagcttgcatacacttcatctcatggtt 26
Query: 301 ttcatggaagaaatacaagataaag 325
|||||||||||||||||||||||||
Sbjct: 25 ttcatggaagaaatacaagataaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_b22.g1 MSMg01no492_b22.g1 CHROMAT_FILE:
MSMg01no492_b22.g1 PHD_FILE: MSMg01no492_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:15 2005
(570 letters)
>mm_chrX_142631879_142632848
Length = 970
Score = 1042 bits (539), Expect = 0.0
Identities = 563/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 1 agtttgaactgaaagtcagaccagactgcaaactcccaaagcctgccaggcatacttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttgaactgaaagtcagaccagactgcaaactcccaaagcctgccaggcatacttcca 260
Query: 61 gtaacagtgttacactgccttctcaaacagtaccttcaaccagaaaccctacatgtgctc 120
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaacattgctacactgccttctcaaacagtaccttcaaccagaaaccctacatgtgctc 320
Query: 121 aaaaagtacattctcactctaaccaccacaattagctatttgtgacataacagaaaagga 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagtacattctcattctaaccaccacaattagctatttgtgacataacagaaaagga 380
Query: 181 ctatcagaagggtagaacttctaggaggaagtggggagacaacactgggtaagatgaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatcagaagggtagaacttctaggaggaagtggggagacaacactgggtaagatgaaag 440
Query: 241 aagaagaatgcattatgtatgaaaatgctataatgaaaatcattactttgtatgctaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaagaatgcattatgtatgaaaatgctataatgaaaatcattactttgtatgctaatt 500
Query: 301 tcaaaactaatcatctatacattttttctggagtgtgatgcttg-tttggtgctctgcca 359
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 501 tcaaaactaatcatctatacattttt-ctggagtgtgatgcttggtttggtgctctgcca 559
Query: 360 atttcttgctcttaaactgtttatgatgtattcaaactcgaggatagctattcatttcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 560 atttcttgctcttaaactgtttatgatgtattcaaactcgaggatagctattcgttttta 619
Query: 420 ctttagtcagatcaatcttagaatatgccattttgttaagaaagattgctaatttcatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttagtcagatcaatcttagaatatgccattttgttaagaaagattgctaatttcatgt 679
Query: 480 tgattacatcctcccccttccacacacaacctccaatcatagctttatctgcactgcttc 539
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 tgattacatcctcccccttccacatacaacctccaatcatagctttatctgcactgcttc 739
Query: 540 attcagcaaactgctgtgggaattgatcatg 570
|||||||||||||||||||||||||||||||
Sbjct: 740 attcagcaaactgctgtgggaattgatcatg 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
