Query= MSMg01no492_f05.b1 MSMg01no492_f05.b1 CHROMAT_FILE:
MSMg01no492_f05.b1 PHD_FILE: MSMg01no492_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:31 2005
(632 letters)
>mm_chrX_105055524_105056554
Length = 1031
Score = 1129 bits (584), Expect = 0.0
Identities = 617/628 (98%), Gaps = 3/628 (0%)
Strand = Plus / Minus
Query: 6 gaattcattag-ttttctgctctactaatttcaaaacaggttttgcttaaaaatgaaaca 64
||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gaattcattagctctt-tgctctactaatttcaaaacaggttttgcttaaaaatgaaaca 773
Query: 65 aattttgtgtctgtagtttaactatagatgtattatatttaaaggacctgttatctaaaa 124
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 772 aattttgtgtctatagtttaactatagatgtattatatttaagggacctgttatctaaaa 713
Query: 125 gatgtaatttaacataattctctttttaaagtctatacagatctgtttataaaaattata 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gatataatttaacataattctctttttaaagtctatacagatctgtttataaaaattata 653
Query: 185 atcacaaaatatttgccagaatctctactcaaatagattattttataatttgttcaaatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atcacaaaatatttgccagaatctctactcaaatagattattttataatttgttcaaatg 593
Query: 245 acaaaatgaattaacttcttcattcttgtatattttaatcttagcacattttattagtct 304
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 592 acaaaatgaattaacttcttcattcttgga-attttaatcttagcacattttattagtct 534
Query: 305 aaaaaaatctaattaaaaaagtaaccctacaacctttttctggttaaatatagcaaagga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aaaaaaatctaattaaaaaagtaaccctacaacctttttctggttaaatatagcaaagga 474
Query: 365 taaagatttttaattaaaaactatagacatttaaaatattgatatgttcaaatatcttta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 473 taaagatttttaattaaaaactatagacatttaaaatattgatatgttcaaatattttta 414
Query: 425 tgcattgttgaatttggaattataatgcatatatgtaatatttcaacaactaaatataac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgcattgttgaatttggaattataatgcatatatgtaatatttcaacaactaaatataac 354
Query: 485 ttacttaagtaagcatgaggaactcacagtaaggtgaagctatttggagacttatattag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttacttaagtaagcatgaggaactcacagtaaggtgaagctatttggagacttatattag 294
Query: 545 gctttttctattgtgtcatgaaagttttatatagccaagatttagaaaaataatttcatt 604
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 293 gctttttctattgtgtcatgaaagttttatatagtcaagatttagaaaaataatttcatt 234
Query: 605 ggaattactatgtcatttatgccataat 632
| ||||||||||||||||||||||||||
Sbjct: 233 gaaattactatgtcatttatgccataat 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_f05.g1 MSMg01no492_f05.g1 CHROMAT_FILE:
MSMg01no492_f05.g1 PHD_FILE: MSMg01no492_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:31 2005
(513 letters)
>mm_chrX_104884295_104885207
Length = 913
Score = 946 bits (489), Expect = 0.0
Identities = 507/513 (98%)
Strand = Plus / Plus
Query: 1 actagtttccttccttgttgaattttatatattcttggaaagaatgttgtcatagaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagtttccttccttgttgaattttatatattcttggaaagaatgttgtcatagaaaca 260
Query: 61 acacacacacacatgcacacacaatgtatagatcttgctttgaaacaggcaagaaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacacacacacatgcacacacaatgtatagatcttgctttgaaacaggcaagaaaaatc 320
Query: 121 aatgtcgaaattgaaaatttaacactcacacaaaactgtattttaattttattaagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtcgaaattgaaaatttaacactcacacaaaactgtattttaattttattaagagaa 380
Query: 181 gtcatacacaggccaaactgtttatttaactagtagctgcatgttacacatcagagttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcatacacaggccaaactgtttatttaactagtagctgcatgttacacatcagagttga 440
Query: 241 cttgtgttcaattcctaataattgacagagagagaacagtttggcaaaaataccatgatt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 cttgtgttcaattcctaataattgacagagagagaactgtttggcaaaaataccatgatt 500
Query: 301 ttgtgatctttcatgataattttttaaatttacttatttatttagctctcaaatattaca 360
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtgatctttcacgataatttttttaatttacttatttatttagctctcaaatattaca 560
Query: 361 ttccaaatgcaatttccccttcctcaactcctcccagttccttcccccattccctctccc 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttccaaatgcaatttcccctttctcaactcctcccagttccttcccccattccctctccc 620
Query: 421 caaaatccactcctccttcatttcccttcagaaaagagcaaacttccagggatatcaacc 480
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 621 caaaatccactcctccttcatttcccttctgaaaagagcaaactcccagggatatcaacc 680
Query: 481 aaacatggcataccaagttataataagactaag 513
|||||||||||||||||||||||||||||||||
Sbjct: 681 aaacatggcataccaagttataataagactaag 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
