Query= MSMg01no492_k21.b1 MSMg01no492_k21.b1 CHROMAT_FILE:
MSMg01no492_k21.b1 PHD_FILE: MSMg01no492_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:58 2005
(615 letters)
>mm_chrX_80537400_80538415
Length = 1016
Score = 1129 bits (584), Expect = 0.0
Identities = 605/612 (98%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 5 gaattctcaaaatt-tatctgcaccagcatttatagatatgtgtaggcatccttttaaat 63
|||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaaattatatatgtaccagcatttatagatatgtgtaggcatccttttaaat 264
Query: 64 ctaagatttgaaactgtgcataaaagcataatcattgtaagaatgatgggatgctgcatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaagatttgaaactgtgcataaaagcataatcattgtaagaatgatgggatgctgcatg 324
Query: 124 agatttgaataactgcctatattgtataatttgtatttggtgaaaatatcagctacgtgc 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 agatttgaataactgcctatattgtataatttgtacttggtgaaaatatcagctacgtgc 384
Query: 184 ttcctccagctgtagacccatgtttctaggcatattggggtccagctgtggctctgcttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcctccagctgtagacccatgtttctaggcatattggggtccagctgtggctctgcttc 444
Query: 244 cttgctcttggggtgaataaatgctcctgcacacctttcaagggtctgcaggattgcagt 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcgctcttggggtgaataaatgctcctgcacacctttcaagggtctgcaggattgcagt 504
Query: 304 ctagctaagagtgaatgccagctgtaggtaggaagagggggagagagaagttcttcttca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctagctaagagtgaatgccagctgtaggtaggaagagggggagagagaagttcttcttca 564
Query: 364 aggatcttagtgctacagctttagacgaagaccttctctgatgatttgaatgaaacaact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 aggatcttagtgctacagctttagacgaagaccttctctgatgatttgaatgaaacagct 624
Query: 424 ctatgatcttagcttgtgtgcatacaatttattcatggtgaacaagttctgtatatgaac 483
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctatgttcttagcttgtgtgcatacaatttattcatggtgaacaagttctgtatatgaac 684
Query: 484 tttggagagtagaaagatgttttcagggtagatgaaatcattggctaacatttaaagtac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttggagagtagaaagatgttttcagggtagatgaaatcattggctaacatttaaagtac 744
Query: 544 tatgaacccctcacttgtgtgaagagggattccaggaaacctcggtatttgctgggcagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tatgaacccctcacttgtgtgaagagggattccaggaaacctcggtatttgctgggcagg 804
Query: 604 aaatagaaagtt 615
||||||||||||
Sbjct: 805 aaatagaaagtt 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space: 608630
Effective search space used: 608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_k21.g1 MSMg01no492_k21.g1 CHROMAT_FILE:
MSMg01no492_k21.g1 PHD_FILE: MSMg01no492_k21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:58 2005
(445 letters)
>mm_chrX_80712151_80712995
Length = 845
Score = 735 bits (380), Expect = 0.0
Identities = 414/434 (95%), Gaps = 14/434 (3%)
Strand = Plus / Minus
Query: 1 caagcctacgtcttataggttatgggctcacattaccagtgaattgggttcactattagt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 420 caagcctacgtcttataggttatgggctcacattaccagggaattgggttcactattagt 361
Query: 61 gaaatgtagacatttgctttgtcacaatcttagattatgactttatcaagatagaagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaaatgtagacatttgctttgtcacaatcttagattatgactttatcaagatagaagtag 301
Query: 121 acttgtgacttgtcctacatttggttaatgtaaccacatgtcatcaaccaactgtaacag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acttgtgactcgtcctacatttggttaatgtaaccacatgtcatcaaccaactgtaacag 241
Query: 181 tgcccaaagaacaaatgagtcctatctcttcttatcattgtctctctgtctccctgcctc 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 240 tgcccaaagaacaaatgagtcctatctcttcttatcattgcctctctgtctccctgcctc 181
Query: 241 tttctctctgtctcccagtctctgtctctctgtatttctctctgtaattctctccttcct 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tccctctctgtctcccagtctctgtctctctgtatttctctctgtaattctctccttcct 121
Query: 301 ctctctctctctctctctctctctctctctctctctctctctctgtctctctctctctct 360
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 120 ctctctctctctctctctctctctctctctc--------------tctctctctctctct 75
Query: 361 cctgattaattaggcaacagcagatatttgtttggtctaaagtatgccctcaaaattggt 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 74 cctgattaattaggcaacagcagatatttgtttggtctaaagtatgcccccaaaattggt 15
Query: 421 gtgttcttgaaaat 434
||||||||||||||
Sbjct: 14 gtgttcttgaaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
