Query= MSMg01no494_c01.b1 MSMg01no494_c01.b1 CHROMAT_FILE:
MSMg01no494_c01.b1 PHD_FILE: MSMg01no494_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:54 2005
(255 letters)
>mm_chrX_12553149_12553807
Length = 659
Score = 412 bits (213), Expect = e-119
Identities = 241/253 (95%), Gaps = 6/253 (2%)
Strand = Plus / Plus
Query: 5 gaattccttggatattatatcaaaagccaaccttttaaaaacaacccccatacacaatca 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattccttgga-attatatcaaaagccaaccttttaaaaacaacccccatatacaatca 263
Query: 65 taggtggttctaagttttggttcattttgctgttggtaagagcccagctgagatgggaat 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taggtgcttctaagttttggttcattttgctgttggtaagagcccagctgagatgggaat 323
Query: 125 gcagcagggaaaaaaaatgcacactggctctttgactgtggcccaggaagctgtgtcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagcagggaaaaaaaatgcacactggctctttgactgtggcccaggaagctgtgtcaga 383
Query: 185 gaagtctgggtttctac-----agccaaataaattcttgagtgggagaggggatgaggag 239
||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 384 gaagtctaggtttctactatacagccaaataaattcttgagcgggaggggggatgaggag 443
Query: 240 tgggtgggggtgg 252
||||||| |||||
Sbjct: 444 tgggtggaggtgg 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 659
Length adjustment: 9
Effective length of query: 246
Effective length of database: 650
Effective search space: 159900
Effective search space used: 159900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no494_c01.g1 MSMg01no494_c01.g1 CHROMAT_FILE:
MSMg01no494_c01.g1 PHD_FILE: MSMg01no494_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:54 2005
(659 letters)
>mm_chrX_12789136_12790194
Length = 1059
Score = 847 bits (438), Expect = 0.0
Identities = 450/454 (99%)
Strand = Plus / Minus
Query: 203 caagatgttcttaggaatgccttatcaacagccctgccttggcctgcctgggggcttgct 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 caagatgttcttaggaatgccttatcaacagccctgccttggcctgcctgggggcttgct 989
Query: 263 ctgctttgttctcagtccaagacggggcagtgggctcttaaacaactcacaagttacaat 322
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 ctgctttgttctcagtcccagacggggcagtgggctcttaaacaactcacaagttacaat 929
Query: 323 attttatcttccttcagactcaggtccactggaagaacagaatgccctcttaaacagtga 382
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 928 attttatcttcctacagactcaggtccactggaagaacaggatgccctcttaaacagtga 869
Query: 383 gccccctctccaataccaattctgtgagaaacattcaaagatggacattgccagcaagga 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gccccctctccaataccaattctgtgagaaacattcaaagatggacattgccagcaagga 809
Query: 443 ttctggagaggcctgagaatccttgcaggtttcaccttttcagtattttgatgttggtgt 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ttctggagaggcctgagaatccttgcaggtttcaccttttcagtattttgatgttggtgt 749
Query: 503 taagagctaactgacttgggctagagagatggcttagccgttaaaggctaggttcacaaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 taagagctaactgacttgggctagagagatggcttagccgttaaaggctaggttcacaaa 689
Query: 563 taaaaagataagagatagctgaggcaaaaaccagtatgaaattaaattaaatttccccca 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 taaaaagataagagatagctgaggcaaaaaccagtatgaaattaaattaaatttccccca 629
Query: 623 ttgttttatcaagcaaaaggatcatatattacct 656
||||||||||| ||||||||||||||||||||||
Sbjct: 628 ttgttttatcaggcaaaaggatcatatattacct 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
