TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCCATATGTCCAGGCGCCATTTTGAGCCGCCTGGATTATGCAGAG
GTCTCCCAGTCAACATCCTTTTCTGACCAGTGGGAACCCTGAGCAGGGAG
AGGGGTCGTGCCTCTACTCTCAAACTAGAGAGAACTGGTTACCTTCATGG
TTCGCCATCACTTTGCCACCTCCTGTGGGAGTCCCAGCCACCTCAAAGCA
CAGAGATCCACTTGCTGAGGTGTGTCTTTCACGGACCAGCCTGAGGCTCT
CAACACTTCCCTAAAGGCGTCCTCCAATCACTATCCTTCCTGCACTGTTG
CAGAGGCTCAGTGGCCAGATTTCAGCCTATGCCAGGACACACCACGCCTC
CAATCCCAAGTGAGGGGCGGGGAAAGCAGCTATCTTCACATGCCTGCTAC
TCTGCTCCCGAGGGGCATTTTCACAGAGTTCCACAGCTGGCCTGGATAAC
TTCGAAGAACTTCATCATGCCACAAGCTTTCCTACCAGCTACTTAAATCT
ATTCTCTGTTGTATACTAGGGAAATCCTGATCATTATTAACGGGTTCTGA
ATAATTCTGTTCACACTAATCTCAATGTGTTTTATTTCTTTTCATTTTGA
TTTTTCAGTACATCTTTTTGGTTATTTTCCTCTGAGTTGCCTGTGACTCA
AGTGTGTGCCAGATGCCTTATCAGTCCAGAAGAGGGCTCGATTCTCCTGG
GATCGATGGCTGTGAGCAATGTGG

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAAGTTTTGAGAGGGAATGCT
GGAGCAGTTCACATAAGGAGACAGAGGGATGAAAATTGTATTAATATGCT
CTCACCCATGATAATCTCCAAAAGAAAGAATTTAGGTTAAAGAATAAAAA
AACAATAAGAGCTTATTTCTTGTGTTCTATATGAATTGCTCCTTATCAGG
TCTTCATTTGGAAATGTCAATCATTCATGAAACTCACGTGGAGCTTTCAC
CCCTGGATGCTTTTTCATAGTTCTTTAGTTAGTTTCTGTAAGACATGATC
TTTCTCAGTAAGTGGGTCTGACCAGGACCTCCCATAGTCCAGGCTGGCCA
GAGACATACAGCAATCTGCCTGCCTCTCTCTCCAGAAGGATGAAGTTACA
GGCATAGGCCAATAATGCCCATATCCCTGTGATTTCAGTAAGAAATATCC
AGAGTTATGTAAATGTTCCTGTAACAGGCCCCTTAAATTTAGCTGTTTTG
GTTACCCATTGAAATATTATTTGTTTACTTTTTCCTACTCATTCAGGAAG
TGCTGAGAAAATCCCTTGGCAGGAAGTGGAACCTATTATCAAGTAAGTTT
TGTCCTTTACCTTTGCTACTATCATGACNATATTTTCTGAGAGTTTGTGA
GGCTATGGNTGACTGAGGTCTTCANGCTTACNATGCTACACTGTGGTACT
TNNACATCATACATNCANTACAATTTCTAGAGAATAACAAAGAAAGGCTT
GTC

Query= MSMg01no496_h16.g1 MSMg01no496_h16.g1 CHROMAT_FILE:
MSMg01no496_h16.g1 PHD_FILE: MSMg01no496_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:49 2005
         (615 letters)



>mm_chrX_146755369_146756385
          Length = 1017

 Score =  768 bits (397), Expect = 0.0
 Identities = 564/622 (90%), Gaps = 14/622 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaaagttttgagagggaatgctggagcagttcacataaggagacagagggatgaaaat 60
           ||||||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||
Sbjct: 203 aagaaagatttgagagggaatactggaacagttcacagaaggagatagagggatg-aaat 261

                                                                       
Query: 61  tgtattaatatgctctcacccatgataatctccaaaagaaagaatttaggttaaagaata 120
            |||||| |||| ||||| ||||||||  |||||||||||||||||||||||||| ||| 
Sbjct: 262 ggtattactatgttctcagccatgataccctccaaaagaaagaatttaggttaaacaat- 320

                                                                       
Query: 121 aaaaaacaataagagcttatttcttgtgttctatatgaattgctccttatcaggtcttca 180
           |||| ||||||||||||||||||||| || |||||| |||||||||||||||| ||||||
Sbjct: 321 aaaacacaataagagcttatttcttgggtcctatataaattgctccttatcagatcttca 380

                                                                       
Query: 181 tttggaaatgtcaatcattcatgaaactcacgtggagctttcacccctggatgctttttc 240
           ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 381 tttggaaatgtcagtcattcatgaaactcacatggagttttcacccctggatgctttttc 440

                                                                       
Query: 241 atagttctttagttagtttctgt-aagacatgatctttctcagtaagtgggtctgaccag 299
           |||||| |||||||| ||||| | || ||||| |||  ||||||| ||||||||||||||
Sbjct: 441 atagttgtttagttactttctttgaa-acatggtctcgctcagtatgtgggtctgaccag 499

                                                                       
Query: 300 gacctcccatagtccaggctggccagagacatacagcaatctgcctgcctctctctccag 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 gacctcccatagtccaggctggccagagacatacagcaatctgcctgcctctctcttcag 559

                                                                       
Query: 360 aaggatgaagttacaggcataggccaataatgcccatatccctgtgatttcagtaagaaa 419
           |||||| |||| ||||||||  |||||||||  |||||||||||||||||||||||||| 
Sbjct: 560 aaggataaagtaacaggcatttgccaataatatccatatccctgtgatttcagtaagaat 619

                                                                       
Query: 420 tatccagagttatgtaaatgttcctgtaacaggccccttaaatttagctgttttggtt-- 477
           ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||  ||  
Sbjct: 620 tatccagagttctgtatatgttcctgtaacaggccccttaagtttagctgtttt--tttt 677

                                                                       
Query: 478 -acccattgaaatat-tatttgtttactttttcctactcattcaggaagtgctga-gaaa 534
            |||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 678 tacccattgaaatatgt-tttgtttactttttcctactcattcaggaagtgttgaagaaa 736

                                                                       
Query: 535 atcccttggca-ggaagtggaacctattatcaagtaagttttgtcctttacctttgctac 593
            ||||||| || |||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 737 -tcccttgtcatggaagtggaacctattatcaggcaagttttgtcctttacctttactac 795

                                 
Query: 594 tatcatgacnatattttctgag 615
           ||||||||| ||||||||||||
Sbjct: 796 tatcatgacaatattttctgag 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1017
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1007
Effective search space:   609235
Effective search space used:   609235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)