XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTA
AATCTCCGGGAATTTGGGGCACCTGTGAGGAATTTTTTTTTCCTGATTTG
ATTATGTGAGATAGGAAGACCAACCCCAAATGTAGATCGTTTGTTCTGTT
GTAGAAACAACTCTACAATATAAATTTCATTGATGTTAGTTTTTTAATAA
AAGTGTGTAGCTAGGACTAAATTCTAGTAGTTTCAATCAAGATAGTTTTT
ATGATTTTACACTGTTTCTGTCTTTTATTACAGTGTTTTCTGAACACTGA
GGTATTATATTTGATGGTGACCTCCCTTGTAGGACTGAATGTTAGAAGGT
CCCTCAGGCTTTGCATATTATCTGGCTGCAAGTCTCTGTATTTGTTTCCA
TCTGCTGCATGAGGATACTTCTGTGATGATGAATGAGCAAGATACAGATC
TGTGAGTATAGCAAAATGTCAACAGGAGTCATTTAACTTCTATACTCCTT
TAGTAGAATAGTAGTATTTGGTCTTTCTCTAGATCCTTGGCATTTCTAGT
TTCAGGTTCTTGGTCATTCAAGCATTGTTGAGTATGGATTCCACTTAATG
ATATCTGTGATTGTATATGCTTGGCACAGGGAATGGCACTATTAGGAGAT
GTGGTCTTGGAGTAGGTGTGTCACTATAGGTGTGGGCTTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTCACCTGAGGAATACCGAATGGCTAAGAAGCACCTGAAACAA
TGTTCACCATCATTAATCAGCAGTGAAATGTAAATCAAAACAACCCTGAA
ATTCCATCTCACACCAGTCAGAATGCCTAGAATCAAATTTTCAGATGACA
GCAGATGCTGGCAAGGATGTGGAGAAAGCAGAAAACTCCTCCATTGTTGG
TGGAATTGCAAGTTTTTAAATTAACTCTGGAAATCAGTCTGGCGGTTCTT
CAGAAAATTGGACATTGTACTACCAGAGGATCCCACAATACAATTCTGGG
CATATATCCAGAAGCTGTTCCAACAGGAAATGGTTACAAATTTGTGGTAC
ATTTACACAATGGAGTTCTACTACTAATAGTACAGCTATTAAAAAGAATG
AGTTTATGAAATTTATAGGCAAATGGTTGGACCTGGAGAGCATCATCCTG
TGTGAGGTAACTCAATCACAAAAGAATGCTTATGATATGTCCTCATTAAT
AAGTGGATATTAGCCCTGAAACCTAGAATACCTCCAAGATATAAGATACA
ATTTGCTAAACACATGANACTCAAGAAGAACGAAGACCAAAATATGGACA
CTTAGCCCCTTCTTAGAATTGGAAACAAAACACCC

Query= MSMg01no500_n14.b1 MSMg01no500_n14.b1 CHROMAT_FILE:
MSMg01no500_n14.b1 PHD_FILE: MSMg01no500_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:34 2005
         (628 letters)



>mm_chrX_122666940_122667967
          Length = 1028

 Score =  994 bits (514), Expect = 0.0
 Identities = 601/638 (94%), Gaps = 18/638 (2%)
 Strand = Plus / Plus

                                                                       
Query: 2   ttggggcacctgtgaggaa---tttttttttcctgatttgattatgtgagataggaagac 58
           |||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |
Sbjct: 199 ttggggcacctgtgaggaattttttttttttcctgatttgattatgtgagataggaagtc 258

                                                                       
Query: 59  caaccccaaatgtagatcgtttgttctgttgtagaaacaactctacaatataaatttcat 118
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 259 caaccccaaatgtagatcgtttgttttgttatagaaacaactctacaatataaatttcat 318

                                                                       
Query: 119 tgatgttagttttttaataaaagtgtgtagctaggactaaattctagtagtttcaatcaa 178
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgatgctagttttttaataaaagtgtgtagctaggactaaattctagtagtttcaatcaa 378

                                                                       
Query: 179 gatagtttttatgattttacactgtttctgtcttttattacagtgttttctgaacactga 238
           ||| ||||||||||| ||| |||||||||||||||||||||||||||  |||| ||||||
Sbjct: 379 gatcgtttttatgatcttatactgtttctgtcttttattacagtgttccctgagcactga 438

                                                                       
Query: 239 ---ggtattatatttgatggtgacctcccttgtaggactgaatgttagaaggtccctcag 295
              ||    | ||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 439 ggggg----agatttgatggtgacctcctttgtgggactgaatgttagaaggtccctcag 494

                                                                       
Query: 296 gctttgcatattatctggctgcaagtctctgtatttgtttccatctgctgcatgaggata 355
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 495 gctttgcatattatctggctgcaattctctgtatttgtttccatctgctgcatgaggata 554

                                                                       
Query: 356 cttctgtgatgatgaatgagcaagatacagatctgtgagtatagcaaaatgtcaacagga 415
           | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 555 cctctgtgatgatgaatgagcaagatacagatctatgagtatagcaaaatgtcaacagga 614

                                                                       
Query: 416 gtcatttaactt--ctatactcctttagtagaatagtagtatttggtctttctctagatc 473
           ||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtcattta--tttgctatactcctttagtagaatagtagtatttggtctttctctagatc 672

                                                                       
Query: 474 cttggcatttctagtttcaggttcttggtcattcaagcattgttgagtatggattccact 533
           | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 673 cctggcatttctagtttcaggttcttggccattcaagcattgttgagtatggattccact 732

                                                                       
Query: 534 taatgatatctgtgattgt----atatgcttggcacagggaatggcactattaggagatg 589
            ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 733 caatgatatctgtgattgtttgtatatgcttggcacagggaatggcactattaggagatg 792

                                                 
Query: 590 tggtcttggagtaggtgtgtcactataggtgtgggctt 627
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tggtcttggagtaggtgtgtcactataggtgtgggctt 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)