Query= MSMg01no502_a19.b1 MSMg01no502_a19.b1 CHROMAT_FILE:
MSMg01no502_a19.b1 PHD_FILE: MSMg01no502_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:59 2005
(489 letters)
>mm_chrX_142136089_142136977
Length = 889
Score = 938 bits (485), Expect = 0.0
Identities = 488/489 (99%)
Strand = Plus / Minus
Query: 1 aggagtcattgcttggcaagacagaaaatttcagaaacaccaatgttgacgccatgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aggagtcattgcttggcaagacagaaaatttcagaaacaccaatgttgacgccatgcatt 630
Query: 61 gtattaaaaatacatatatcatgctttaacaaattgcataaattatcctttagaagatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtattaaaaatacatatatcatgctttaacaaattgcataaattatcctttagaagatgt 570
Query: 121 tatcctcaatctttaattaagtgcttatgttaccgcttacgtatgtataagtgaatgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tatcctcaatctttaattaagtgcttatgttaccgcttacgtatgtataagtgaatgcta 510
Query: 181 ttttctgtggtggccaaaggcatttgatcccccttggaccccaatgtgggtatgtaaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 509 ttttctgtggtggccaaaggcatttgatcccccttggaccccaatgtgggtacgtaaaaa 450
Query: 241 tcaaacttagctcctctacaagagctctatatactcttaattgttggtgcccagagctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcaaacttagctcctctacaagagctctatatactcttaattgttggtgcccagagctta 390
Query: 301 taagttcttaacagatcatttatggaaatgaacttaatgtgccttattcttaccattaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taagttcttaacagatcatttatggaaatgaacttaatgtgccttattcttaccattaag 330
Query: 361 agttcaattatcataaattcaaaaatgattacagtgattatgattcatgtaccattcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agttcaattatcataaattcaaaaatgattacagtgattatgattcatgtaccattcatt 270
Query: 421 tactaagaactgtgatgtatttggtcatatatttctgttattgacaatataaaggtcaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tactaagaactgtgatgtatttggtcatatatttctgttattgacaatataaaggtcaca 210
Query: 481 atgaagaag 489
|||||||||
Sbjct: 209 atgaagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_a19.g1 MSMg01no502_a19.g1 CHROMAT_FILE:
MSMg01no502_a19.g1 PHD_FILE: MSMg01no502_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:59 2005
(618 letters)
>mm_chrX_141976804_141977821
Length = 1018
Score = 1160 bits (600), Expect = 0.0
Identities = 613/618 (99%), Gaps = 2/618 (0%)
Strand = Plus / Plus
Query: 1 tttagatattctccattcccttttattttgtttaatgagaaaaaaaaaaaaagaactgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 tttagatattctccattcccttttattttgtttaatgagaaaaaaaaaaa--gaactgat 260
Query: 61 ttttatgcacatcaactgacagtacaggcttggataaagcagttaacattgctacgcctg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 ttttatgcacatcaactgacagtacaggcttggataaaccagttaacattgctacgcctg 320
Query: 121 gaattctgcacctgacaattgcttctgttaatgaacatctgtcctactggattggtgtga 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 gaattctgcatctgacaattgcttctgttaatgaacatctgtcctactggattgctgtga 380
Query: 181 ttgtcaaatgagataatgaatgtataaaaactctatgaacggtaagtgcttcacaatcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtcaaatgagataatgaatgtataaaaactctatgaacggtaagtgcttcacaatcgc 440
Query: 241 agtgtgttaataaccataataatctctttaaaatggatatggcttttgtttctgtgactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgtgttaataaccataataatctctttaaaatggatatggcttttgtttctgtgactg 500
Query: 301 ccttttgcttcagaagctagacatttgccctttaaaaggtcagagattccaaatcagcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttttgcttcagaagctagacatttgccctttaaaaggtcagagattccaaatcagcca 560
Query: 361 gtcggtctgttccgtgtttatgagattattccgaggcaaattgccatttagcaaattgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcggtctgttccgtgtttatgagattattccgaggcaaattgccatttagcaaattgca 620
Query: 421 caaattgaaacctttggttcgaactagaattaagctgaaaggtattctctgaggcatctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaattgaaacctttggttcgaactagaattaagctgaaaggtattctctgaggcatctg 680
Query: 481 acgtgtgttaaaatttctcttattgtgagacagaataacagtgtcagagcaatccacacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acgtgtgttaaaatttctcttattgtgagacagaataacagtgtcagagcaatccacacg 740
Query: 541 caggttcagcttcatagtgttgcagagacagtaaagcttgacagaaaaccaccatttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caggttcagcttcatagtgttgcagagacagtaaagcttgacagaaaaccaccatttgat 800
Query: 601 cctaatgagtagtggaag 618
||||||||||||||||||
Sbjct: 801 cctaatgagtagtggaag 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
