Query= MSMg01no503_k18.b1 MSMg01no503_k18.b1 CHROMAT_FILE:
MSMg01no503_k18.b1 PHD_FILE: MSMg01no503_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:01 2005
(631 letters)
>mm_chrX_163908877_163909907
Length = 1031
Score = 1166 bits (603), Expect = 0.0
Identities = 624/631 (98%)
Strand = Plus / Plus
Query: 1 ataatgacagctacatgagagtggggagagagacacttaggaaaacccgagtttacatac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ataatgacagctacatgagagtggggagagagacacttaggaaaataggagtttacatac 260
Query: 61 tccaagtgtaaacaaatttcagtgccagttccatgttcttcaaaatttagtgaatgcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaagtgtaaacaaatttcagtgccagttccatgttcttcaaaatttagtgaatgcaac 320
Query: 121 gctacctgtgacggtatttgcatacatgcaccaagcttatgcttgtttatttgtttattt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 gctacctgtgacggtatttgcatacatgcaccaggcttatgcttgtttatttgtttattt 380
Query: 181 atttatttaaaattatgtacatgtaccactgtactattatgccattataaaacatacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttatttaaaattatgtacatgtaccactgtactattatgccattataaaacatacaca 440
Query: 241 aatttataaaaactagataaaaataaacacaagtatcattctagtatgttcttcctatac 300
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacataaaaaaactagataaaaataaacacaagtatcattctagtatgttcttcctatac 500
Query: 301 tctaatggacatgaactccagttaggagccccatgcttaatgaaggtgagggggcctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctaatggacatgaactccagttaggagccccatgcttaatgaaggtgagggggcctttt 560
Query: 361 gagatttttgaatagtaaagacttgctttaggagaacagaaacttactggagtagtcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagatttttgaatagtaaagacttgctttaggagaacagaaacttactggagtagtcaca 620
Query: 421 ggaaattagagattggctagaaagacccagagctatttccctgaggcttctcaaagaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaaattagagattggctagaaagacccagagctatttccctgaggcttctcaaagaacc 680
Query: 481 acaatggagtaggaagttgttctagctagatttgcaatttgaaaacagaccatcatttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaatggagtaggaagttgttctagctagatttgcaatttgaaaacagaccatcatttcc 740
Query: 541 ctgtatgcttcttttcagagtatgcactacacacaaatgtgttctgcacacaatcaggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgtatgcttcttttcagagtatgcactacacacaaatgtgttctgcacacaatcaggat 800
Query: 601 acagtatgcatcgaaaacaaacatcctccac 631
|||||||||||||||||||||||||||||||
Sbjct: 801 acagtatgcatcgaaaacaaacatcctccac 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_k18.g1 MSMg01no503_k18.g1 CHROMAT_FILE:
MSMg01no503_k18.g1 PHD_FILE: MSMg01no503_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:01 2005
(631 letters)
>mm_chrX_164073270_164074301
Length = 1032
Score = 1123 bits (581), Expect = 0.0
Identities = 593/597 (99%), Gaps = 1/597 (0%)
Strand = Plus / Minus
Query: 36 gtttagtgcactattgtgaggtttctctggctagctttagggaagatgagttccagtccc 95
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1028 gtttagtgcactattgtgaggtttctctggctagctttagggaagatgagttccagtctc 969
Query: 96 tgtggcatccatggaggtggagtgagaagaacagaaaacaagggcagaagtacattatga 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 tgtggcatccatggaggtggagtgagaagaacagaaaacaagggcagaagtacattatga 909
Query: 156 ttttgaggccctttctatgtccttcattttgaactatgttgaatgctgaagcaccataca 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ttttgaggccctttctatgtccttcattttgaactatgttgaatgctgaagcaccataca 849
Query: 216 ctggggtaccccaacacttctgattcaggcatctctgaaactgatggtgtgagatgaggt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ctggggtaccccaacacttctgattcaggcatctctgaaactgatggtgtgagatgaggt 789
Query: 276 taagtgctagcagctttgctgggtgtctcaacgaacccaaagacatgacttgattattat 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 taagtgctagcagctttgctgggtgtctcaacgaacccaaagacatgacttgattattat 729
Query: 336 tgcatcctacacattagtgttccattaacataaaagtcatctcttaaacacattgaactg 395
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 728 tgcatcctacacattagtgttccattaacataaaagtcatctcttaaacacactgaactg 669
Query: 396 aactcaattagtctaattgattaccagcctagctgtagggattttgcagctttagggaaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aactcaattagtctaattgattaccagcctagctgtagggattttgcagctttagggaaa 609
Query: 456 ctgacaaacatcttgccctttcagatcctacaattagattcacaagtgacagtcaataag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctgacaaacatcttgccctttcagatcctacaattagattcacaagtgacagtcaataag 549
Query: 516 catttctcaggctccaaattcatcgtctataatgatggc-aaaatctctcagggtggatg 574
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 548 catttctcaggctccaaattcatcgtctataatgatggcaaaaatctctcagggtggatg 489
Query: 575 aactagatgctgatgaaatactaattgtggaaatagttttcagtagtgatgctggca 631
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aactagatgttgatgaaatactaattgtggaaatagttttcagtagtgatgctggca 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
