ATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTTATCTCTGTACCCCATTTTTAATAGGGTTATTTGGTTCT
CTGGAGTCTAACTTCTTGAATTCTTTGTATATATTGGATATTAGTCCTCT
ATTGGCTGTAGGATTGGTAAAGTTACTTTGTCAATATCTAGATTCATAGA
GGAAGAGTCAGTGTCCCAGTATCAGTATCAGGAATAAAATTCAAGAGTTC
CAGACATCTTCAATTCTGAACATTCCTATCTCGGTCATTGTACTTTGAAT
ATAATCTATATTCTCTAAAAAAAAAAGTCAATAGGTGAATTTCAGGAGAA
TTTCTGATAAGTACTGAATGAGTCTGGACAATGGCAAAAGGACAGTTGCT
AACTGAGTATAACACAACACATGTATAATATTTTGGAACACAATTGTGTT
TGTTTCTGTATTTGTTTACATCACATAAAACATACATCCTGATACACAGG
CTGTTTTTGTGATGAGGCAGTGCATTCTGGCCAATGAGCAAGGGACTAAG
ACTTTATGTAGATGGAGACTGGTGAGGTCCTTCTGAGTCAAGATCTACAG
TTCTCCCTCCCTCCGTGTGAGCTAGAAGCCAGCCCGACTGTTACGTAAAG
CAATGGCTAAGGATGATGTGTGGAAGCTAGCGAAGGTACAGAATGTGGAG
AACCTGGGTTACAACTCCTCTCAGTCATCTCATCAATGCCTTCCATTCAC
CAAAAAATATATCTT

CAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGGAATGCTTCTCCAAACAAATCAG
GCATTCACAGTACTTTAAATTTCAGCTAAGGATTTGACTCACCCTGAAAA
CTCCTTCCCACTCTCCAAGACCTTGTTCAAGCCCTTGTCCACCCCAAATA
AAGTGTATGTATACAAGCCCATGCTGAATAAAGATATGTGCACAAACTAA
GATCAGCTAAGAGAGCAATCTTCCTATCACATGCATTCACTCTCAACTAG
ACCAAGATCCTGTAGACCCCACTTGTTTGGAGCTCTGCTTCATCCTTCAA
GCCCATTGTGCAGTGGTACCAGGACAACCTGAGGGAGGAACCCCAACATA
AATACCACAGCCCTGCACCTCACCTAGGCAACACAATAGAGTTGACTCTG
CAGGCATGGGCATGGGTGAGCCAGCCCAGGGGGCATGAGAGCAGGAGACC
TGGCTCTGTCCATTACCAGTTGTGACACTGGGTATGATAGCCAGGACAGT
GCCAGAAAGCGTTCCCTGGTGATGTGGGTGCAGGAGATATGATTGGTTCA
GATACCTCCTGGGTTCAGATCCAGGGCTTTGATTTAGCCGACCTCATCTT
CTAGCCTATTGGTTATCTGCTGGTGTGTATGTTAAGGGGCCGGTCCTACA
AATTAAAAGCTGTAGGATCTTGTTAATGCATAGAAATGTGGACACACTGT
GGGACACACTGTGATACGCTATAGC

Query= MSMg01no506_j16.b1 MSMg01no506_j16.b1 CHROMAT_FILE:
MSMg01no506_j16.b1 PHD_FILE: MSMg01no506_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:52 2005
         (706 letters)



>mm_chrX_111970634_111971739
          Length = 1106

 Score = 1326 bits (686), Expect = 0.0
 Identities = 698/702 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgtttatctctgtaccccatttttaatagggttatttggttctctggagtct 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctctgtaccccatttttaatagggttatttggttctctggagtct 264

                                                                       
Query: 65  aacttcttgaattctttgtatatattggatattagtcctctattggctgtaggattggta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacttcttgaattctttgtatatattggatattagtcctctattggctgtaggattggta 324

                                                                       
Query: 125 aagttactttgtcaatatctagattcatagaggaagagtcagtgtcccagtatcagtatc 184
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 aagttactttgtcaatatctagattcgtagaggaagagtcagtgtcccagtatcagtatc 384

                                                                       
Query: 185 aggaataaaattcaagagttccagacatcttcaattctgaacattcctatctcggtcatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggaataaaattcaagagttccagacatcttcaattctgaacattcctatctcggtcatt 444

                                                                       
Query: 245 gtactttgaatataatctatattctctaaaaaaaaaagtcaataggtgaatttcaggaga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtactttgaatataatctatattctctaaaaaaaaaagtcaataggtgaatttcaggaga 504

                                                                       
Query: 305 atttctgataagtactgaatgagtctggacaatggcaaaaggacagttgctaactgagta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttctgataagtactgaatgagtctggacaatggcaaaaggacagttgctaactgagta 564

                                                                       
Query: 365 taacacaacacatgtataatattttggaacacaattgtgtttgtttctgtatttgtttac 424
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taacacaacacaggtataatattttggaacacaattgtgtttgtttctgtatttgtttac 624

                                                                       
Query: 425 atcacataaaacatacatcctgatacacaggctgtttttgtgatgaggcagtgcattctg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atcacataaaacatacatcctgatacacaggctgtttttgtgatgaggcagtgcattctg 684

                                                                       
Query: 485 gccaatgagcaagggactaagactttatgtagatggagactggtgaggtccttctgagtc 544
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gacaatgagcaagggactaagactttatgtagatggagactggtgaggtccttctgagtc 744

                                                                       
Query: 545 aagatctacagttctccctccctccgtgtgagctagaagccagcccgactgttacgtaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagatctacagttctccctccctccgtgtgagctagaagccagcccgactgttacgtaaa 804

                                                                       
Query: 605 gcaatggctaaggatgatgtgtggaagctagcgaaggtacagaatgtggagaacctgggt 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gcaatggctaaggatgatgtgtggaagctagcgaaggtacagaatgtggagaacctgggt 864

                                                     
Query: 665 tacaactcctctcagtcatctcatcaatgccttccattcacc 706
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tacaactcctctcagtcatctcatcaatgccttccattcacc 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space:   762816
Effective search space used:   762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)