NNNAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTTGGGTTTTATTGAAGGGAACAAGAGCGAGGGCACCTGAC
AGGGTTCTTGGTCCCATTGGGAGATTTCCTCTTTAATTCATTTTCTACAC
TGTGTAATCAAATGAGGTTCACTTAAAGAAAAACATAAGTTTTAGGGTTC
TTTTTTTTAATTCTGTGTGCTTTGGTTTTAGGTAGCTATAGATATCCCTG
ACCTTGCCAGGAATACTCTAGTGTTATCCTGAAGTGTGCTTTAAGTGAAG
TGGTCTTCAGAAAACACCCGAGACACTCCTAGCTCATAACCTTCACACCA
AATCTGTCTAGAATGTAAAGACCACCCCACTCCCTGCCTTACCAAACAAA
AAGAACCTGGACCATGGTGTGAAACATGCTGCATGTGTGACTTGGTAACC
TCACACTGATATGAATCATAAAAAGCACTGCAGTGATTACAAAAACAGTC
ACAGGGATGAAATGATATGCAAATAAATGCATAATATTTAAATAATACCT
TAAGTCAGAAGGCATGAGCTAATGAAATGAGCAGTGTAGAAGGTGATTAT
TATAGTCAACTTTTCAGTAATAGTTATTTCTCATTTTAATTTCATTTTAA
CTTTTAAATTTGTTGTCTAACAAACAATAATTATGTATACATAGTACTGG
AGTAGAGTGGGGTATTTCAATGCACTGGTCAAACCAGAGCAATTAGCATT
TTTATCTCCTTATN

NTTTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAGGTAGACTCCAGG
AAATCAAATAAACCCTTAAAAATGGGCTCAGAGCTAAACAAAGAATTCTC
ACCTGAGGAATACCGAATGGCTGAAAAGCACCTGAAAAAATGTCCAGCAT
CCTTGATCATCAGGGAAATGCAAATCAAAATAACCCTGAGATTCCATCTC
ACACCAGTCAGAATGGCTAAGATCAAACTTCAGGTGACAGCAGATGCTGT
TGAGGATGTGGAGAAAGAGGAACCCTCTTCCATTGTTGGTGGGATTGCAA
GCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGG
AAATAGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGCATATATCCA
GAAGATGTTCCAACTGGTAATAAGGACACATGCTGCACTATGGTCATAGC
AGCCTTATTTATAATAGTCAGAAGCTGGAAATAACCCAGATGTCCCTCAA
AAGATGAAAGCATACAGAAAATGTGGTACATTTACAAAATAGAGTAGTAT
TCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATTGATGGA
CCTGGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAC
ATGATATGTACTTACTGATNAGTGGATATTAGNCCCAGAAACTTAGAATA
CCCCAGATATANNGAAACAGTTTTGGAGAAAACCNNN

Query= MSMg01no508_c20.b1 MSMg01no508_c20.b1 CHROMAT_FILE:
MSMg01no508_c20.b1 PHD_FILE: MSMg01no508_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:00 2005
         (656 letters)



>mm_chrX_140216585_140217640
          Length = 1056

 Score = 1230 bits (636), Expect = 0.0
 Identities = 648/652 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttgggttttattgaagggaacaagagcgagggcacctgacagggttcttggtc 64
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattccttgggttttattgaagggaacaagagtgagggcacctgacagggttcttggtc 264

                                                                       
Query: 65  ccattgggagatttcctctttaattcattttctacactgtgtaatcaaatgaggttcact 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 ccattgggagatttcctctttaattcattttctacactgtgtaatcaaatgaggctcact 324

                                                                       
Query: 125 taaagaaaaacataagttttagggttcttttttttaattctgtgtgctttggttttaggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaagaaaaacataagttttagggttcttttttttaattctgtgtgctttggttttaggt 384

                                                                       
Query: 185 agctatagatatccctgaccttgccaggaatactctagtgttatcctgaagtgtgcttta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agctatagatatccctgaccttgccaggaatactctagtgttatcctgaagtgtgcttta 444

                                                                       
Query: 245 agtgaagtggtcttcagaaaacacccgagacactcctagctcataaccttcacaccaaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtgaagtggtcttcagaaaacacccgagacactcctagctcataaccttcacaccaaat 504

                                                                       
Query: 305 ctgtctagaatgtaaagaccaccccactccctgccttaccaaacaaaaagaacctggacc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgtctagaatgtaaagaccaccccactccctgccttaccaaacaaaaagaacctggacc 564

                                                                       
Query: 365 atggtgtgaaacatgctgcatgtgtgacttggtaacctcacactgatatgaatcataaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atggtgtgaaacatgctgcatgtgtgacttggtaacctcacactgatatgaatcataaaa 624

                                                                       
Query: 425 agcactgcagtgattacaaaaacagtcacagggatgaaatgatatgcaaataaatgcata 484
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcactgcagtgattaaaaaaacagtcacagggatgaaatgatatgcaaataaatgcata 684

                                                                       
Query: 485 atatttaaataataccttaagtcagaaggcatgagctaatgaaatgagcagtgtagaagg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 atatttaaataataccttaagtcagaaggcatgagctaatgaaatgagcggtgtagaagg 744

                                                                       
Query: 545 tgattattatagtcaacttttcagtaatagttatttctcattttaatttcattttaactt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgattattatagtcaacttttcagtaatagttatttctcattttaatttcattttaactt 804

                                                               
Query: 605 ttaaatttgttgtctaacaaacaataattatgtatacatagtactggagtag 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttaaatttgttgtctaacaaacaataattatgtatacatagtactggagtag 856


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)